Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.65□□□□□ -1.34
CLCN3P51790 AL391987.1-201ENST00000441025 200 ntBASIC6.65□□□□□ -1.34
CLCN3P51790 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
CLCN3P51790 PPIAP20-201ENST00000449839 135 ntBASIC6.65□□□□□ -1.34
CLCN3P51790 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.65□□□□□ -1.34
CLCN3P51790 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.65□□□□□ -1.34
CLCN3P51790 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.65□□□□□ -1.34
CLCN3P51790 AP000926.3-201ENST00000497201 299 ntBASIC6.65□□□□□ -1.34
CLCN3P51790 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CLCN3P51790 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.65□□□□□ -1.34
CLCN3P51790 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.65□□□□□ -1.34
CLCN3P51790 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.65□□□□□ -1.34
CLCN3P51790 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.65□□□□□ -1.34
CLCN3P51790 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.65□□□□□ -1.34
CLCN3P51790 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.65□□□□□ -1.34
CLCN3P51790 AC116667.2-201ENST00000641075 823 ntBASIC6.65□□□□□ -1.34
CLCN3P51790 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.65□□□□□ -1.34
CLCN3P51790 CCNT2P1-201ENST00000423082 1315 ntBASIC6.65□□□□□ -1.35
CLCN3P51790 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.65□□□□□ -1.35
CLCN3P51790 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.65□□□□□ -1.35
CLCN3P51790 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CLCN3P51790 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CLCN3P51790 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CLCN3P51790 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CLCN3P51790 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
CLCN3P51790 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CLCN3P51790 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.64□□□□□ -1.35
CLCN3P51790 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CLCN3P51790 AC073342.2-201ENST00000595842 1800 ntBASIC6.64□□□□□ -1.35
CLCN3P51790 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
CLCN3P51790 AC027088.4-201ENST00000611559 1947 ntBASIC6.64□□□□□ -1.35
CLCN3P51790 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
CLCN3P51790 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.64□□□□□ -1.35
CLCN3P51790 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CLCN3P51790 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
CLCN3P51790 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CLCN3P51790 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CLCN3P51790 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CLCN3P51790 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.64□□□□□ -1.35
CLCN3P51790 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.64□□□□□ -1.35
CLCN3P51790 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CLCN3P51790 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.64□□□□□ -1.35
CLCN3P51790 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
CLCN3P51790 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CLCN3P51790 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CLCN3P51790 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CLCN3P51790 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CLCN3P51790 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
CLCN3P51790 RN7SKP69-201ENST00000365390 305 ntBASIC6.64□□□□□ -1.35
CLCN3P51790 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.64□□□□□ -1.35
CLCN3P51790 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
CLCN3P51790 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.64□□□□□ -1.35
CLCN3P51790 NMD3P2-201ENST00000421815 761 ntBASIC6.64□□□□□ -1.35
CLCN3P51790 AL035660.1-201ENST00000422041 222 ntBASIC6.64□□□□□ -1.35
CLCN3P51790 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.64□□□□□ -1.35
CLCN3P51790 BMS1P10-201ENST00000443754 1120 ntBASIC6.64□□□□□ -1.35
CLCN3P51790 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.64□□□□□ -1.35
CLCN3P51790 AP006222.1-205ENST00000450734 457 ntBASIC6.64□□□□□ -1.35
CLCN3P51790 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.64□□□□□ -1.35
CLCN3P51790 AC083795.1-201ENST00000491760 320 ntBASIC6.64□□□□□ -1.35
CLCN3P51790 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
CLCN3P51790 AC110056.1-201ENST00000525759 911 ntBASIC6.64□□□□□ -1.35
CLCN3P51790 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CLCN3P51790 PCNAP4-201ENST00000532690 730 ntBASIC6.64□□□□□ -1.35
CLCN3P51790 AC012146.2-201ENST00000576545 416 ntBASIC6.64□□□□□ -1.35
CLCN3P51790 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC6.64□□□□□ -1.35
CLCN3P51790 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
CLCN3P51790 AL117378.2-201ENST00000622916 1337 ntBASIC6.64□□□□□ -1.35
CLCN3P51790 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.64□□□□□ -1.35
CLCN3P51790 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CLCN3P51790 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
CLCN3P51790 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CLCN3P51790 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.64□□□□□ -1.35
CLCN3P51790 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
CLCN3P51790 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CLCN3P51790 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
CLCN3P51790 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.63□□□□□ -1.35
CLCN3P51790 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CLCN3P51790 OLMALINC-203ENST00000641087 3779 ntBASIC6.63□□□□□ -1.35
CLCN3P51790 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CLCN3P51790 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
CLCN3P51790 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CLCN3P51790 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CLCN3P51790 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
CLCN3P51790 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.63□□□□□ -1.35
CLCN3P51790 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
CLCN3P51790 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
CLCN3P51790 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.63□□□□□ -1.35
CLCN3P51790 SELENOWP1-201ENST00000322792 252 ntBASIC6.63□□□□□ -1.35
CLCN3P51790 TMSB4XP4-201ENST00000323496 618 ntBASIC6.63□□□□□ -1.35
CLCN3P51790 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CLCN3P51790 AC240504.1-201ENST00000395709 845 ntBASIC6.63□□□□□ -1.35
CLCN3P51790 CDY17P-201ENST00000414121 1282 ntBASIC6.63□□□□□ -1.35
CLCN3P51790 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.63□□□□□ -1.35
CLCN3P51790 KIF4CP-201ENST00000422742 1279 ntBASIC6.63□□□□□ -1.35
CLCN3P51790 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.63□□□□□ -1.35
CLCN3P51790 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.63□□□□□ -1.35
CLCN3P51790 AL512637.1-201ENST00000439523 1231 ntBASIC6.63□□□□□ -1.35
CLCN3P51790 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC6.63□□□□□ -1.35
CLCN3P51790 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms