Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC116353.3-201ENST00000511215 249 ntBASIC7.74□□□□□ -1.17
USP11P51784 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC7.74□□□□□ -1.17
USP11P51784 MTATP6P1-201ENST00000514057 681 ntBASIC7.74□□□□□ -1.17
USP11P51784 RNU6-964P-201ENST00000516524 69 ntBASIC7.74□□□□□ -1.17
USP11P51784 HMGB1P1-201ENST00000522557 636 ntBASIC7.74□□□□□ -1.17
USP11P51784 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.74□□□□□ -1.17
USP11P51784 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
USP11P51784 SETP17-201ENST00000534163 817 ntBASIC7.74□□□□□ -1.17
USP11P51784 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC7.74□□□□□ -1.17
USP11P51784 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC7.74□□□□□ -1.17
USP11P51784 AC022001.1-201ENST00000605193 268 ntBASIC7.74□□□□□ -1.17
USP11P51784 AC013468.1-201ENST00000608680 598 ntBASIC7.74□□□□□ -1.17
USP11P51784 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC7.74□□□□□ -1.17
USP11P51784 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.74□□□□□ -1.17
USP11P51784 AL132796.3-201ENST00000624703 900 ntBASIC7.74□□□□□ -1.17
USP11P51784 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
USP11P51784 SPATA31C1-201ENST00000420021 3895 ntBASIC7.74□□□□□ -1.17
USP11P51784 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
USP11P51784 AC079949.2-201ENST00000617117 2933 ntBASIC7.74□□□□□ -1.17
USP11P51784 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.74□□□□□ -1.17
USP11P51784 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
USP11P51784 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
USP11P51784 CCDC150P1-201ENST00000537123 2215 ntBASIC7.74□□□□□ -1.17
USP11P51784 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.74□□□□□ -1.17
USP11P51784 AC004014.2-201ENST00000623718 5122 ntBASIC7.73□□□□□ -1.17
USP11P51784 Z97989.1-201ENST00000531702 2421 ntBASIC7.73□□□□□ -1.17
USP11P51784 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
USP11P51784 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
USP11P51784 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC7.73□□□□□ -1.17
USP11P51784 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
USP11P51784 AC092821.3-202ENST00000641304 2767 ntBASIC7.73□□□□□ -1.17
USP11P51784 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.73□□□□□ -1.17
USP11P51784 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
USP11P51784 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
USP11P51784 AL589993.1-201ENST00000407450 2524 ntBASIC7.73□□□□□ -1.17
USP11P51784 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
USP11P51784 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
USP11P51784 RNU6-468P-201ENST00000384003 109 ntBASIC7.73□□□□□ -1.17
USP11P51784 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
USP11P51784 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC7.73□□□□□ -1.17
USP11P51784 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC7.73□□□□□ -1.17
USP11P51784 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
USP11P51784 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
USP11P51784 UBE2V1P9-201ENST00000414760 368 ntBASIC7.73□□□□□ -1.17
USP11P51784 AC000089.1-201ENST00000424559 801 ntBASIC7.73□□□□□ -1.17
USP11P51784 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.73□□□□□ -1.17
USP11P51784 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC7.73□□□□□ -1.17
USP11P51784 E2F6P1-201ENST00000428850 745 ntBASIC7.73□□□□□ -1.17
USP11P51784 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.73□□□□□ -1.17
USP11P51784 AC091390.2-201ENST00000432573 374 ntBASIC7.73□□□□□ -1.17
USP11P51784 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.73□□□□□ -1.17
USP11P51784 MTCO2P16-201ENST00000436962 677 ntBASIC7.73□□□□□ -1.17
USP11P51784 ARF4P4-201ENST00000439608 520 ntBASIC7.73□□□□□ -1.17
USP11P51784 E2F6P3-201ENST00000441743 743 ntBASIC7.73□□□□□ -1.17
USP11P51784 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.73□□□□□ -1.17
USP11P51784 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.73□□□□□ -1.17
USP11P51784 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC7.73□□□□□ -1.17
USP11P51784 MTCYBP3-201ENST00000445588 1137 ntBASIC7.73□□□□□ -1.17
USP11P51784 AL929288.2-201ENST00000446368 407 ntBASIC7.73□□□□□ -1.17
USP11P51784 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
USP11P51784 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.73□□□□□ -1.17
USP11P51784 TFP1-201ENST00000460564 572 ntTSL 4 BASIC7.73□□□□□ -1.17
USP11P51784 RN7SL834P-201ENST00000461450 286 ntBASIC7.73□□□□□ -1.17
USP11P51784 RPS17P11-201ENST00000474297 293 ntBASIC7.73□□□□□ -1.17
USP11P51784 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC7.73□□□□□ -1.17
USP11P51784 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC7.73□□□□□ -1.17
USP11P51784 RN7SL382P-201ENST00000482631 282 ntBASIC7.73□□□□□ -1.17
USP11P51784 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC7.73□□□□□ -1.17
USP11P51784 TFP1-203ENST00000490470 561 ntTSL 4 BASIC7.73□□□□□ -1.17
USP11P51784 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.73□□□□□ -1.17
USP11P51784 MTND3P5-201ENST00000512798 333 ntBASIC7.73□□□□□ -1.17
USP11P51784 AC010442.1-201ENST00000515583 816 ntBASIC7.73□□□□□ -1.17
USP11P51784 RNU6-1129P-201ENST00000515964 104 ntBASIC7.73□□□□□ -1.17
USP11P51784 RNU6-491P-201ENST00000516099 110 ntBASIC7.73□□□□□ -1.17
USP11P51784 MTCO1P49-201ENST00000523429 802 ntBASIC7.73□□□□□ -1.17
USP11P51784 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
USP11P51784 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC7.73□□□□□ -1.17
USP11P51784 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
USP11P51784 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC7.73□□□□□ -1.17
USP11P51784 CTSLP2-201ENST00000580501 394 ntBASIC7.73□□□□□ -1.17
USP11P51784 AC012065.3-201ENST00000602736 439 ntBASIC7.73□□□□□ -1.17
USP11P51784 RPS4XP21-201ENST00000603814 750 ntBASIC7.73□□□□□ -1.17
USP11P51784 AC017083.3-201ENST00000609955 700 ntBASIC7.73□□□□□ -1.17
USP11P51784 AC068944.2-201ENST00000610373 403 ntBASIC7.73□□□□□ -1.17
USP11P51784 AL158062.1-201ENST00000619632 745 ntBASIC7.73□□□□□ -1.17
USP11P51784 AC131009.3-201ENST00000621809 287 ntBASIC7.73□□□□□ -1.17
USP11P51784 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC7.73□□□□□ -1.17
USP11P51784 AC090897.3-201ENST00000636973 1157 ntBASIC7.73□□□□□ -1.17
USP11P51784 AC103706.2-201ENST00000638080 240 ntBASIC7.73□□□□□ -1.17
USP11P51784 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.73□□□□□ -1.17
USP11P51784 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
USP11P51784 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
USP11P51784 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
USP11P51784 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
USP11P51784 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.73□□□□□ -1.17
USP11P51784 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
USP11P51784 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
USP11P51784 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.73□□□□□ -1.17
USP11P51784 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
USP11P51784 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms