Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.4□□□□□ -1.38
LHX1P48742 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
LHX1P48742 AC093829.1-201ENST00000506662 1618 ntBASIC6.4□□□□□ -1.38
LHX1P48742 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.4□□□□□ -1.38
LHX1P48742 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
LHX1P48742 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.4□□□□□ -1.38
LHX1P48742 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.38
LHX1P48742 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
LHX1P48742 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
LHX1P48742 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
LHX1P48742 SNORA70H-201ENST00000383910 135 ntBASIC6.4□□□□□ -1.38
LHX1P48742 SNORA70J-201ENST00000384182 135 ntBASIC6.4□□□□□ -1.38
LHX1P48742 SNRPEP6-201ENST00000407465 277 ntBASIC6.4□□□□□ -1.38
LHX1P48742 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.4□□□□□ -1.38
LHX1P48742 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.4□□□□□ -1.38
LHX1P48742 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.4□□□□□ -1.38
LHX1P48742 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.4□□□□□ -1.38
LHX1P48742 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
LHX1P48742 OR6C71P-201ENST00000432580 913 ntBASIC6.4□□□□□ -1.38
LHX1P48742 BMS1P10-201ENST00000443754 1120 ntBASIC6.4□□□□□ -1.38
LHX1P48742 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.4□□□□□ -1.38
LHX1P48742 AC115223.1-201ENST00000466377 870 ntBASIC6.4□□□□□ -1.38
LHX1P48742 AL122020.1-201ENST00000472287 459 ntBASIC6.4□□□□□ -1.38
LHX1P48742 CCDC11P1-201ENST00000503137 1162 ntBASIC6.4□□□□□ -1.38
LHX1P48742 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.4□□□□□ -1.38
LHX1P48742 MTCO3P42-201ENST00000509488 518 ntBASIC6.4□□□□□ -1.38
LHX1P48742 AC090568.1-201ENST00000509499 856 ntBASIC6.4□□□□□ -1.38
LHX1P48742 MTCO3P39-201ENST00000514812 518 ntBASIC6.4□□□□□ -1.38
LHX1P48742 RNA5SP271-201ENST00000516700 88 ntBASIC6.4□□□□□ -1.38
LHX1P48742 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.4□□□□□ -1.38
LHX1P48742 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.4□□□□□ -1.38
LHX1P48742 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.4□□□□□ -1.38
LHX1P48742 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.4□□□□□ -1.38
LHX1P48742 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.4□□□□□ -1.38
LHX1P48742 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.4□□□□□ -1.38
LHX1P48742 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.4□□□□□ -1.38
LHX1P48742 AC015982.1-201ENST00000608113 465 ntBASIC6.4□□□□□ -1.38
LHX1P48742 AL357153.4-201ENST00000620487 1016 ntBASIC6.4□□□□□ -1.38
LHX1P48742 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.4□□□□□ -1.38
LHX1P48742 AC129915.3-201ENST00000634128 948 ntBASIC6.4□□□□□ -1.38
LHX1P48742 AL596275.2-208ENST00000641192 594 ntBASIC6.4□□□□□ -1.38
LHX1P48742 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
LHX1P48742 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.4□□□□□ -1.38
LHX1P48742 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
LHX1P48742 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
LHX1P48742 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
LHX1P48742 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
LHX1P48742 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.4□□□□□ -1.39
LHX1P48742 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
LHX1P48742 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
LHX1P48742 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
LHX1P48742 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
LHX1P48742 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
LHX1P48742 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
LHX1P48742 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.4□□□□□ -1.39
LHX1P48742 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
LHX1P48742 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
LHX1P48742 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
LHX1P48742 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
LHX1P48742 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.39□□□□□ -1.39
LHX1P48742 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LHX1P48742 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LHX1P48742 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
LHX1P48742 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.39□□□□□ -1.39
LHX1P48742 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.39□□□□□ -1.39
LHX1P48742 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
LHX1P48742 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.39□□□□□ -1.39
LHX1P48742 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.39□□□□□ -1.39
LHX1P48742 OR7E25P-201ENST00000344844 931 ntBASIC6.39□□□□□ -1.39
LHX1P48742 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.39□□□□□ -1.39
LHX1P48742 AC016739.1-201ENST00000405359 345 ntBASIC6.39□□□□□ -1.39
LHX1P48742 MYL6P5-201ENST00000412707 459 ntBASIC6.39□□□□□ -1.39
LHX1P48742 SLC20A1P1-201ENST00000413906 956 ntBASIC6.39□□□□□ -1.39
LHX1P48742 BX284632.2-201ENST00000421091 399 ntBASIC6.39□□□□□ -1.39
LHX1P48742 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.39□□□□□ -1.39
LHX1P48742 AL512605.1-202ENST00000441919 381 ntBASIC6.39□□□□□ -1.39
LHX1P48742 AL359955.2-201ENST00000445380 353 ntBASIC6.39□□□□□ -1.39
LHX1P48742 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.39□□□□□ -1.39
LHX1P48742 AC104164.1-201ENST00000460282 590 ntBASIC6.39□□□□□ -1.39
LHX1P48742 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.39□□□□□ -1.39
LHX1P48742 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.39□□□□□ -1.39
LHX1P48742 AC007494.1-201ENST00000562293 760 ntBASIC6.39□□□□□ -1.39
LHX1P48742 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.39□□□□□ -1.39
LHX1P48742 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.39□□□□□ -1.39
LHX1P48742 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.39□□□□□ -1.39
LHX1P48742 MIR4776-2-201ENST00000580204 80 ntBASIC6.39□□□□□ -1.39
LHX1P48742 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC6.39□□□□□ -1.39
LHX1P48742 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.39□□□□□ -1.39
LHX1P48742 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LHX1P48742 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LHX1P48742 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
LHX1P48742 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.39□□□□□ -1.39
LHX1P48742 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LHX1P48742 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.39□□□□□ -1.39
LHX1P48742 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LHX1P48742 AC027088.4-201ENST00000611559 1947 ntBASIC6.38□□□□□ -1.39
LHX1P48742 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.38□□□□□ -1.39
LHX1P48742 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.38□□□□□ -1.39
LHX1P48742 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LHX1P48742 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms