Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NKX2-1P43699 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
NKX2-1P43699 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-1P43699 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.1□□□□□ -1.59
NKX2-1P43699 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-1P43699 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX2-1P43699 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC5.1□□□□□ -1.59
NKX2-1P43699 AL161742.1-201ENST00000418154 584 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 AL139184.1-202ENST00000422303 222 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 ETF1P1-206ENST00000427296 984 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 IGLV3-4-201ENST00000432300 244 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 AC114402.2-201ENST00000432760 643 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 ZFAND6P1-201ENST00000434138 605 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC5.1□□□□□ -1.59
NKX2-1P43699 AL731534.1-201ENST00000434711 269 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-1P43699 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NKX2-1P43699 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX2-1P43699 RPS15AP29-201ENST00000445539 400 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 UBBP5-201ENST00000446970 266 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX2-1P43699 CCRL1P1-201ENST00000449542 1053 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 AC019084.1-201ENST00000457337 432 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.1□□□□□ -1.59
NKX2-1P43699 RPS16P9-201ENST00000477220 427 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX2-1P43699 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-1P43699 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.1□□□□□ -1.59
NKX2-1P43699 PCNAP1-201ENST00000505363 709 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX2-1P43699 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NKX2-1P43699 AC093815.1-201ENST00000508637 280 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
NKX2-1P43699 OR4V1P-201ENST00000525394 1140 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 RPA2P3-201ENST00000533268 770 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.1□□□□□ -1.59
NKX2-1P43699 AP001804.2-201ENST00000533932 910 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-1P43699 DCN-215ENST00000550099 719 ntTSL 2 BASIC5.1□□□□□ -1.59
NKX2-1P43699 QRSL1P3-201ENST00000552666 1316 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 AC126323.4-201ENST00000566935 234 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX2-1P43699 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-1P43699 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX2-1P43699 MIR4433B-201ENST00000581329 102 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX2-1P43699 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX2-1P43699 MIR132-201ENST00000591554 101 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 AC245052.7-201ENST00000601161 359 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX2-1P43699 AC012511.1-201ENST00000608140 449 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX2-1P43699 AC006924.1-201ENST00000610750 559 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-1P43699 AL391262.2-201ENST00000622466 494 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 AC061999.1-201ENST00000624454 177 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX2-1P43699 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NKX2-1P43699 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NKX2-1P43699 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.1□□□□□ -1.59
NKX2-1P43699 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-1P43699 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-1P43699 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
NKX2-1P43699 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-1P43699 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-1P43699 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-1P43699 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX2-1P43699 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-1P43699 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.09□□□□□ -1.59
NKX2-1P43699 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NKX2-1P43699 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NKX2-1P43699 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NKX2-1P43699 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
NKX2-1P43699 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.09□□□□□ -1.59
NKX2-1P43699 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NKX2-1P43699 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NKX2-1P43699 AL442128.2-201ENST00000620246 1824 ntBASIC5.09□□□□□ -1.59
NKX2-1P43699 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NKX2-1P43699 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.09□□□□□ -1.59
NKX2-1P43699 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NKX2-1P43699 RBPJP6-201ENST00000411556 1431 ntBASIC5.09□□□□□ -1.59
NKX2-1P43699 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NKX2-1P43699 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NKX2-1P43699 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
NKX2-1P43699 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
NKX2-1P43699 RNU4-39P-201ENST00000362455 127 ntBASIC5.09□□□□□ -1.59
NKX2-1P43699 SNORD16-201ENST00000362803 99 ntBASIC5.09□□□□□ -1.59
NKX2-1P43699 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
NKX2-1P43699 MIR99A-201ENST00000384906 81 ntBASIC5.09□□□□□ -1.59
NKX2-1P43699 OR1F12-201ENST00000402365 945 ntBASIC5.09□□□□□ -1.59
NKX2-1P43699 NFU1P1-201ENST00000413128 774 ntBASIC5.09□□□□□ -1.59
NKX2-1P43699 AL354868.1-201ENST00000417077 482 ntBASIC5.09□□□□□ -1.59
NKX2-1P43699 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
NKX2-1P43699 AL157884.1-201ENST00000424561 454 ntBASIC5.09□□□□□ -1.59
NKX2-1P43699 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5.09□□□□□ -1.59
NKX2-1P43699 EIF2S2P3-201ENST00000428356 999 ntBASIC5.09□□□□□ -1.59
NKX2-1P43699 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.09□□□□□ -1.59
NKX2-1P43699 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms