Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CASQ1P31415 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CASQ1P31415 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CASQ1P31415 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CASQ1P31415 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CASQ1P31415 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.42□□□□□ -1.38
CASQ1P31415 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
CASQ1P31415 RNU1-84P-201ENST00000365447 164 ntBASIC6.42□□□□□ -1.38
CASQ1P31415 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CASQ1P31415 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.42□□□□□ -1.38
CASQ1P31415 RN7SKP121-201ENST00000410842 305 ntBASIC6.42□□□□□ -1.38
CASQ1P31415 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.42□□□□□ -1.38
CASQ1P31415 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.42□□□□□ -1.38
CASQ1P31415 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CASQ1P31415 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.42□□□□□ -1.38
CASQ1P31415 VN1R53P-201ENST00000429536 957 ntBASIC6.42□□□□□ -1.38
CASQ1P31415 RPL3P11-201ENST00000434028 1146 ntBASIC6.42□□□□□ -1.38
CASQ1P31415 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.42□□□□□ -1.38
CASQ1P31415 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.42□□□□□ -1.38
CASQ1P31415 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.42□□□□□ -1.38
CASQ1P31415 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.42□□□□□ -1.38
CASQ1P31415 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC6.42□□□□□ -1.38
CASQ1P31415 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CASQ1P31415 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.42□□□□□ -1.38
CASQ1P31415 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.42□□□□□ -1.38
CASQ1P31415 AP000859.1-201ENST00000525536 307 ntBASIC6.42□□□□□ -1.38
CASQ1P31415 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.42□□□□□ -1.38
CASQ1P31415 NF1P12-201ENST00000549593 583 ntBASIC6.42□□□□□ -1.38
CASQ1P31415 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.42□□□□□ -1.38
CASQ1P31415 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.42□□□□□ -1.38
CASQ1P31415 RPL29P33-201ENST00000587474 316 ntBASIC6.42□□□□□ -1.38
CASQ1P31415 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.42□□□□□ -1.38
CASQ1P31415 AC012175.1-201ENST00000603755 531 ntBASIC6.42□□□□□ -1.38
CASQ1P31415 AL591167.1-201ENST00000607321 456 ntBASIC6.42□□□□□ -1.38
CASQ1P31415 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CASQ1P31415 AC015660.5-201ENST00000623238 564 ntBASIC6.42□□□□□ -1.38
CASQ1P31415 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.42□□□□□ -1.38
CASQ1P31415 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.42□□□□□ -1.38
CASQ1P31415 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.42□□□□□ -1.38
CASQ1P31415 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.42□□□□□ -1.38
CASQ1P31415 AC002525.1-201ENST00000624392 1622 ntBASIC6.42□□□□□ -1.38
CASQ1P31415 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CASQ1P31415 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CASQ1P31415 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CASQ1P31415 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.42□□□□□ -1.38
CASQ1P31415 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CASQ1P31415 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CASQ1P31415 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CASQ1P31415 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.41□□□□□ -1.38
CASQ1P31415 AC005005.4-201ENST00000623789 16698 ntBASIC6.41□□□□□ -1.38
CASQ1P31415 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CASQ1P31415 AC144833.1-201ENST00000567953 4089 ntBASIC6.41□□□□□ -1.38
CASQ1P31415 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CASQ1P31415 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CASQ1P31415 RN7SKP185-201ENST00000362813 326 ntBASIC6.41□□□□□ -1.38
CASQ1P31415 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CASQ1P31415 RPL11P3-201ENST00000395256 523 ntBASIC6.41□□□□□ -1.38
CASQ1P31415 RN7SKP221-201ENST00000410420 301 ntBASIC6.41□□□□□ -1.38
CASQ1P31415 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.41□□□□□ -1.38
CASQ1P31415 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC6.41□□□□□ -1.38
CASQ1P31415 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.41□□□□□ -1.38
CASQ1P31415 AL589794.1-201ENST00000424971 390 ntBASIC6.41□□□□□ -1.38
CASQ1P31415 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.41□□□□□ -1.38
CASQ1P31415 CRIP1P1-201ENST00000427567 185 ntBASIC6.41□□□□□ -1.38
CASQ1P31415 RPL22P11-201ENST00000434894 385 ntBASIC6.41□□□□□ -1.38
CASQ1P31415 PHBP4-201ENST00000437447 837 ntBASIC6.41□□□□□ -1.38
CASQ1P31415 MED28P3-201ENST00000444288 531 ntBASIC6.41□□□□□ -1.38
CASQ1P31415 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.41□□□□□ -1.38
CASQ1P31415 AC023271.1-201ENST00000445936 1090 ntBASIC6.41□□□□□ -1.38
CASQ1P31415 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CASQ1P31415 AC092421.1-201ENST00000448148 418 ntBASIC6.41□□□□□ -1.38
CASQ1P31415 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.41□□□□□ -1.38
CASQ1P31415 AKR1D1P1-201ENST00000457236 936 ntBASIC6.41□□□□□ -1.38
CASQ1P31415 RN7SL836P-201ENST00000476140 296 ntBASIC6.41□□□□□ -1.38
CASQ1P31415 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.41□□□□□ -1.38
CASQ1P31415 AC106760.2-201ENST00000504159 619 ntBASIC6.41□□□□□ -1.38
CASQ1P31415 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.41□□□□□ -1.38
CASQ1P31415 RPL7L1P7-201ENST00000509986 724 ntBASIC6.41□□□□□ -1.38
CASQ1P31415 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.41□□□□□ -1.38
CASQ1P31415 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.41□□□□□ -1.38
CASQ1P31415 AP006437.1-202ENST00000530327 933 ntBASIC6.41□□□□□ -1.38
CASQ1P31415 AP004609.2-201ENST00000532177 190 ntBASIC6.41□□□□□ -1.38
CASQ1P31415 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.41□□□□□ -1.38
CASQ1P31415 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.41□□□□□ -1.38
CASQ1P31415 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.41□□□□□ -1.38
CASQ1P31415 AL513327.3-201ENST00000602618 469 ntBASIC6.41□□□□□ -1.38
CASQ1P31415 RPS4XP21-201ENST00000603814 750 ntBASIC6.41□□□□□ -1.38
CASQ1P31415 uc_338.26-201ENST00000612659 160 ntBASIC6.41□□□□□ -1.38
CASQ1P31415 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.41□□□□□ -1.38
CASQ1P31415 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.41□□□□□ -1.38
CASQ1P31415 AC011933.2-201ENST00000578539 2790 ntBASIC6.41□□□□□ -1.38
CASQ1P31415 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC6.41□□□□□ -1.38
CASQ1P31415 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CASQ1P31415 AC009962.1-201ENST00000567327 3813 ntBASIC6.41□□□□□ -1.38
CASQ1P31415 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.41□□□□□ -1.38
CASQ1P31415 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CASQ1P31415 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.41□□□□□ -1.38
CASQ1P31415 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.41□□□□□ -1.38
CASQ1P31415 AC079248.1-201ENST00000427568 1546 ntBASIC6.4□□□□□ -1.38
CASQ1P31415 MTCO1P15-201ENST00000529569 1526 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms