Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 RPS21P8-201ENST00000413365 247 ntBASIC6.61□□□□□ -1.35
HOXC8P31273 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.61□□□□□ -1.35
HOXC8P31273 AC103563.5-201ENST00000455643 364 ntBASIC6.61□□□□□ -1.35
HOXC8P31273 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.61□□□□□ -1.35
HOXC8P31273 NENFP3-201ENST00000503735 313 ntBASIC6.61□□□□□ -1.35
HOXC8P31273 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.61□□□□□ -1.35
HOXC8P31273 ATP5LP3-201ENST00000514223 304 ntBASIC6.61□□□□□ -1.35
HOXC8P31273 RNA5SP362-201ENST00000516048 118 ntBASIC6.61□□□□□ -1.35
HOXC8P31273 CYCSP22-201ENST00000517555 339 ntBASIC6.61□□□□□ -1.35
HOXC8P31273 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC8P31273 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC6.61□□□□□ -1.35
HOXC8P31273 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC8P31273 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
HOXC8P31273 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC8P31273 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC8P31273 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
HOXC8P31273 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.61□□□□□ -1.35
HOXC8P31273 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.61□□□□□ -1.35
HOXC8P31273 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC8P31273 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC8P31273 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.6□□□□□ -1.35
HOXC8P31273 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
HOXC8P31273 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC8P31273 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC8P31273 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXC8P31273 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC8P31273 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXC8P31273 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC8P31273 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
HOXC8P31273 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC8P31273 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC8P31273 RNA5SP333-201ENST00000363466 118 ntBASIC6.6□□□□□ -1.35
HOXC8P31273 RNA5SP334-201ENST00000364825 118 ntBASIC6.6□□□□□ -1.35
HOXC8P31273 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXC8P31273 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.6□□□□□ -1.35
HOXC8P31273 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.6□□□□□ -1.35
HOXC8P31273 RPL34P3-201ENST00000421454 338 ntBASIC6.6□□□□□ -1.35
HOXC8P31273 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXC8P31273 RN7SL57P-201ENST00000493687 290 ntBASIC6.6□□□□□ -1.35
HOXC8P31273 AC008629.2-201ENST00000503783 483 ntBASIC6.6□□□□□ -1.35
HOXC8P31273 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
HOXC8P31273 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
HOXC8P31273 GTF2IP11-201ENST00000526931 420 ntBASIC6.6□□□□□ -1.35
HOXC8P31273 AP005639.1-201ENST00000526939 192 ntBASIC6.6□□□□□ -1.35
HOXC8P31273 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXC8P31273 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.6□□□□□ -1.35
HOXC8P31273 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.6□□□□□ -1.35
HOXC8P31273 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
HOXC8P31273 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC8P31273 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.6□□□□□ -1.35
HOXC8P31273 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.6□□□□□ -1.35
HOXC8P31273 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.6□□□□□ -1.35
HOXC8P31273 AP001496.3-201ENST00000580230 913 ntBASIC6.6□□□□□ -1.35
HOXC8P31273 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.6□□□□□ -1.35
HOXC8P31273 AC022919.1-201ENST00000624979 626 ntBASIC6.6□□□□□ -1.35
HOXC8P31273 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXC8P31273 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.6□□□□□ -1.35
HOXC8P31273 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
HOXC8P31273 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
HOXC8P31273 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
HOXC8P31273 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC8P31273 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC8P31273 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC8P31273 AL391262.1-201ENST00000556558 1992 ntBASIC6.6□□□□□ -1.35
HOXC8P31273 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC8P31273 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.6□□□□□ -1.35
HOXC8P31273 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC8P31273 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
HOXC8P31273 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
HOXC8P31273 MAPK10-365ENST00000641902 3825 ntBASIC6.6□□□□□ -1.35
HOXC8P31273 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXC8P31273 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC8P31273 AOX3P-204ENST00000491025 2107 ntBASIC6.59□□□□□ -1.35
HOXC8P31273 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC8P31273 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.59□□□□□ -1.35
HOXC8P31273 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
HOXC8P31273 AC016583.1-201ENST00000624221 2431 ntBASIC6.59□□□□□ -1.35
HOXC8P31273 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
HOXC8P31273 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC8P31273 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC8P31273 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC8P31273 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC8P31273 AC093829.1-201ENST00000506662 1618 ntBASIC6.59□□□□□ -1.35
HOXC8P31273 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC8P31273 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC8P31273 AL391361.1-201ENST00000405580 489 ntBASIC6.59□□□□□ -1.35
HOXC8P31273 RPL36P18-201ENST00000419316 318 ntBASIC6.59□□□□□ -1.35
HOXC8P31273 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC8P31273 AC002504.1-201ENST00000438281 691 ntBASIC6.59□□□□□ -1.35
HOXC8P31273 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC8P31273 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC8P31273 AC104164.1-201ENST00000460282 590 ntBASIC6.59□□□□□ -1.35
HOXC8P31273 RPSAP37-201ENST00000470913 821 ntBASIC6.59□□□□□ -1.35
HOXC8P31273 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC8P31273 AC068522.1-201ENST00000482895 345 ntBASIC6.59□□□□□ -1.35
HOXC8P31273 RPS4XP14-201ENST00000493072 781 ntBASIC6.59□□□□□ -1.35
HOXC8P31273 RPL7L1P4-201ENST00000513004 707 ntBASIC6.59□□□□□ -1.35
HOXC8P31273 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC8P31273 AC112191.2-201ENST00000522428 333 ntBASIC6.59□□□□□ -1.35
HOXC8P31273 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms