Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMBP28068 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMBP28068 AL359091.1-201ENST00000449048 1734 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 AC123769.1-201ENST00000530992 3192 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMBP28068 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMBP28068 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMBP28068 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMBP28068 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMBP28068 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMBP28068 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMBP28068 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMBP28068 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMBP28068 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMBP28068 RNA5SP346-201ENST00000363541 121 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMBP28068 MIR1275-201ENST00000408770 80 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 AC002069.1-201ENST00000429649 1159 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 IGLV3-4-201ENST00000432300 244 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 AL354893.1-201ENST00000433735 348 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 ARMC4P1-201ENST00000438905 707 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 SOCS5P1-201ENST00000440415 949 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 AC093166.3-201ENST00000448785 303 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 RAB28P2-201ENST00000454299 641 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 RN7SL552P-201ENST00000462094 276 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 AC104339.1-201ENST00000465478 348 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 RPL12P31-201ENST00000478433 450 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 PFN2-209ENST00000481275 560 ntTSL 4 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 AC124945.1-201ENST00000485133 188 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 AC114728.1-201ENST00000488289 483 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 AC106822.1-201ENST00000502647 526 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 AC112484.3-201ENST00000505910 329 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMBP28068 Vault.2-201ENST00000516519 98 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 RNA5SP441-201ENST00000516809 88 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 OR6M2P-201ENST00000529831 871 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMBP28068 MIR4433B-201ENST00000581329 102 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMBP28068 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 RN7SL261P-201ENST00000613441 282 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 MIR6721-201ENST00000617181 87 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 AL591926.1-201ENST00000620542 217 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 AC073592.6-201ENST00000624271 415 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMBP28068 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMBP28068 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMBP28068 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMBP28068 AC140134.1-201ENST00000511830 3544 ntBASIC4.63□□□□□ -1.67
HLA-DMBP28068 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HLA-DMBP28068 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMBP28068 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DMBP28068 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DMBP28068 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DMBP28068 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DMBP28068 UGT2B24P-201ENST00000514441 1597 ntBASIC4.62□□□□□ -1.67
HLA-DMBP28068 AC125336.1-201ENST00000508893 2827 ntBASIC4.62□□□□□ -1.67
HLA-DMBP28068 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 AC025470.1-201ENST00000510053 2032 ntBASIC4.62□□□□□ -1.67
HLA-DMBP28068 CASC19-246ENST00000641625 1606 ntBASIC4.62□□□□□ -1.67
HLA-DMBP28068 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DMBP28068 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DMBP28068 AC090220.1-201ENST00000593078 1699 ntBASIC4.62□□□□□ -1.67
HLA-DMBP28068 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 OR56A4-201ENST00000330728 1209 ntBASIC4.62□□□□□ -1.67
HLA-DMBP28068 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DMBP28068 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 AL096800.1-201ENST00000405326 893 ntBASIC4.62□□□□□ -1.67
HLA-DMBP28068 REREP1Y-201ENST00000422655 198 ntBASIC4.62□□□□□ -1.67
HLA-DMBP28068 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DMBP28068 AL365220.1-201ENST00000432923 399 ntBASIC4.62□□□□□ -1.67
HLA-DMBP28068 GAPDHP75-201ENST00000433910 943 ntBASIC4.62□□□□□ -1.67
HLA-DMBP28068 REREP2Y-201ENST00000439103 200 ntBASIC4.62□□□□□ -1.67
HLA-DMBP28068 AL138899.2-201ENST00000439139 499 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms