Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.09□□□□□ -1.59
COL8A2P25067 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.09□□□□□ -1.59
COL8A2P25067 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.09□□□□□ -1.59
COL8A2P25067 AC114728.1-201ENST00000488289 483 ntBASIC5.09□□□□□ -1.59
COL8A2P25067 AC083795.1-201ENST00000491760 320 ntBASIC5.09□□□□□ -1.59
COL8A2P25067 PSMA2P2-201ENST00000504319 686 ntBASIC5.09□□□□□ -1.59
COL8A2P25067 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.09□□□□□ -1.59
COL8A2P25067 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.09□□□□□ -1.59
COL8A2P25067 SNORA81.2-201ENST00000516868 170 ntBASIC5.09□□□□□ -1.59
COL8A2P25067 IGLVIV-64-201ENST00000518581 301 ntBASIC5.09□□□□□ -1.59
COL8A2P25067 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.09□□□□□ -1.59
COL8A2P25067 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.09□□□□□ -1.59
COL8A2P25067 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.09□□□□□ -1.59
COL8A2P25067 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.09□□□□□ -1.59
COL8A2P25067 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.09□□□□□ -1.59
COL8A2P25067 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.09□□□□□ -1.59
COL8A2P25067 AC008521.2-201ENST00000591021 259 ntBASIC5.09□□□□□ -1.59
COL8A2P25067 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.09□□□□□ -1.59
COL8A2P25067 MIR6793-201ENST00000612376 63 ntBASIC5.09□□□□□ -1.59
COL8A2P25067 AC008691.1-209ENST00000642094 814 ntBASIC5.09□□□□□ -1.59
COL8A2P25067 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL8A2P25067 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL8A2P25067 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL8A2P25067 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
COL8A2P25067 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL8A2P25067 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL8A2P25067 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.09□□□□□ -1.59
COL8A2P25067 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
COL8A2P25067 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.6
COL8A2P25067 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
COL8A2P25067 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.6
COL8A2P25067 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
COL8A2P25067 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
COL8A2P25067 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.09□□□□□ -1.6
COL8A2P25067 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
COL8A2P25067 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.08□□□□□ -1.6
COL8A2P25067 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL8A2P25067 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL8A2P25067 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
COL8A2P25067 LINC01616-201ENST00000561816 2280 ntBASIC5.08□□□□□ -1.6
COL8A2P25067 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
COL8A2P25067 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL8A2P25067 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL8A2P25067 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL8A2P25067 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.08□□□□□ -1.6
COL8A2P25067 CCNT2P1-201ENST00000423082 1315 ntBASIC5.08□□□□□ -1.6
COL8A2P25067 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL8A2P25067 AC092692.1-201ENST00000623625 2595 ntBASIC5.08□□□□□ -1.6
COL8A2P25067 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL8A2P25067 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL8A2P25067 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.08□□□□□ -1.6
COL8A2P25067 RN7SKP78-201ENST00000364711 318 ntBASIC5.08□□□□□ -1.6
COL8A2P25067 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
COL8A2P25067 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.08□□□□□ -1.6
COL8A2P25067 RN7SKP161-201ENST00000411110 305 ntBASIC5.08□□□□□ -1.6
COL8A2P25067 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.08□□□□□ -1.6
COL8A2P25067 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.08□□□□□ -1.6
COL8A2P25067 AC007562.1-201ENST00000421819 517 ntBASIC5.08□□□□□ -1.6
COL8A2P25067 AC007568.1-201ENST00000422912 471 ntBASIC5.08□□□□□ -1.6
COL8A2P25067 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.08□□□□□ -1.6
COL8A2P25067 BX323845.3-201ENST00000428215 527 ntBASIC5.08□□□□□ -1.6
COL8A2P25067 TUBB4BP6-201ENST00000437576 479 ntBASIC5.08□□□□□ -1.6
COL8A2P25067 H3F3BP1-201ENST00000440551 403 ntBASIC5.08□□□□□ -1.6
COL8A2P25067 AC023274.2-201ENST00000445264 521 ntBASIC5.08□□□□□ -1.6
COL8A2P25067 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.08□□□□□ -1.6
COL8A2P25067 RPL23AP60-201ENST00000450011 454 ntBASIC5.08□□□□□ -1.6
COL8A2P25067 AL451063.1-201ENST00000450164 1133 ntBASIC5.08□□□□□ -1.6
COL8A2P25067 AC112187.1-201ENST00000455837 479 ntBASIC5.08□□□□□ -1.6
COL8A2P25067 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.08□□□□□ -1.6
COL8A2P25067 AC104109.1-201ENST00000498563 436 ntBASIC5.08□□□□□ -1.6
COL8A2P25067 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL8A2P25067 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC5.08□□□□□ -1.6
COL8A2P25067 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.08□□□□□ -1.6
COL8A2P25067 SETP21-201ENST00000514799 892 ntBASIC5.08□□□□□ -1.6
COL8A2P25067 SNORD46.2-201ENST00000516021 102 ntBASIC5.08□□□□□ -1.6
COL8A2P25067 AC022826.1-201ENST00000519383 805 ntBASIC5.08□□□□□ -1.6
COL8A2P25067 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.08□□□□□ -1.6
COL8A2P25067 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.08□□□□□ -1.6
COL8A2P25067 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.08□□□□□ -1.6
COL8A2P25067 OR6M2P-201ENST00000529831 871 ntBASIC5.08□□□□□ -1.6
COL8A2P25067 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.08□□□□□ -1.6
COL8A2P25067 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.08□□□□□ -1.6
COL8A2P25067 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.08□□□□□ -1.6
COL8A2P25067 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.08□□□□□ -1.6
COL8A2P25067 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.08□□□□□ -1.6
COL8A2P25067 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL8A2P25067 AC027243.2-201ENST00000602530 724 ntBASIC5.08□□□□□ -1.6
COL8A2P25067 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.08□□□□□ -1.6
COL8A2P25067 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.08□□□□□ -1.6
COL8A2P25067 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.08□□□□□ -1.6
COL8A2P25067 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
COL8A2P25067 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
COL8A2P25067 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.08□□□□□ -1.6
COL8A2P25067 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL8A2P25067 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.08□□□□□ -1.6
COL8A2P25067 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
COL8A2P25067 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL8A2P25067 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL8A2P25067 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL8A2P25067 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms