Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AP001052.1-201ENST00000626421 99 ntBASIC6.21□□□□□ -1.42
CAPN3P20807 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.21□□□□□ -1.42
CAPN3P20807 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.21□□□□□ -1.42
CAPN3P20807 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.21□□□□□ -1.42
CAPN3P20807 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
CAPN3P20807 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CAPN3P20807 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CAPN3P20807 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.21□□□□□ -1.42
CAPN3P20807 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CAPN3P20807 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CAPN3P20807 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CAPN3P20807 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CAPN3P20807 PSMC1P6-201ENST00000477233 1319 ntBASIC6.21□□□□□ -1.42
CAPN3P20807 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CAPN3P20807 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
CAPN3P20807 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.21□□□□□ -1.42
CAPN3P20807 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CAPN3P20807 AC011455.2-201ENST00000599320 3336 ntBASIC6.2□□□□□ -1.42
CAPN3P20807 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.2□□□□□ -1.42
CAPN3P20807 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CAPN3P20807 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.2□□□□□ -1.42
CAPN3P20807 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.2□□□□□ -1.42
CAPN3P20807 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CAPN3P20807 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
CAPN3P20807 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.2□□□□□ -1.42
CAPN3P20807 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CAPN3P20807 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CAPN3P20807 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.2□□□□□ -1.42
CAPN3P20807 RNU4-7P-201ENST00000364758 141 ntBASIC6.2□□□□□ -1.42
CAPN3P20807 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CAPN3P20807 SNORA70.9-201ENST00000384370 135 ntBASIC6.2□□□□□ -1.42
CAPN3P20807 UBBP1-201ENST00000392399 473 ntBASIC6.2□□□□□ -1.42
CAPN3P20807 HMGB3P7-201ENST00000400214 611 ntBASIC6.2□□□□□ -1.42
CAPN3P20807 RPL7P58-201ENST00000402913 758 ntBASIC6.2□□□□□ -1.42
CAPN3P20807 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.2□□□□□ -1.42
CAPN3P20807 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.2□□□□□ -1.42
CAPN3P20807 RN7SKP86-201ENST00000410454 332 ntBASIC6.2□□□□□ -1.42
CAPN3P20807 NENFP1-201ENST00000419476 466 ntBASIC6.2□□□□□ -1.42
CAPN3P20807 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CAPN3P20807 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.2□□□□□ -1.42
CAPN3P20807 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.2□□□□□ -1.42
CAPN3P20807 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.2□□□□□ -1.42
CAPN3P20807 E2F6P3-201ENST00000441743 743 ntBASIC6.2□□□□□ -1.42
CAPN3P20807 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.2□□□□□ -1.42
CAPN3P20807 VN1R38P-201ENST00000450265 887 ntBASIC6.2□□□□□ -1.42
CAPN3P20807 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.2□□□□□ -1.42
CAPN3P20807 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.2□□□□□ -1.42
CAPN3P20807 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.2□□□□□ -1.42
CAPN3P20807 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.2□□□□□ -1.42
CAPN3P20807 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.2□□□□□ -1.42
CAPN3P20807 AC091965.3-201ENST00000506236 208 ntBASIC6.2□□□□□ -1.42
CAPN3P20807 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
CAPN3P20807 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.2□□□□□ -1.42
CAPN3P20807 MAST4-IT1-201ENST00000514241 658 ntBASIC6.2□□□□□ -1.42
CAPN3P20807 SUMO2P19-201ENST00000518920 295 ntBASIC6.2□□□□□ -1.42
CAPN3P20807 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.2□□□□□ -1.42
CAPN3P20807 AP001804.1-201ENST00000526868 919 ntBASIC6.2□□□□□ -1.42
CAPN3P20807 OR4A40P-201ENST00000533878 948 ntBASIC6.2□□□□□ -1.42
CAPN3P20807 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.2□□□□□ -1.42
CAPN3P20807 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.2□□□□□ -1.42
CAPN3P20807 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.2□□□□□ -1.42
CAPN3P20807 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC6.2□□□□□ -1.42
CAPN3P20807 AC134669.1-201ENST00000581275 672 ntBASIC6.2□□□□□ -1.42
CAPN3P20807 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.2□□□□□ -1.42
CAPN3P20807 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CAPN3P20807 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
CAPN3P20807 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.2□□□□□ -1.42
CAPN3P20807 AL162233.1-201ENST00000620014 944 ntBASIC6.2□□□□□ -1.42
CAPN3P20807 AC019080.5-201ENST00000624891 757 ntBASIC6.2□□□□□ -1.42
CAPN3P20807 AC068213.1-201ENST00000625124 226 ntBASIC6.2□□□□□ -1.42
CAPN3P20807 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.2□□□□□ -1.42
CAPN3P20807 AC073488.9-201ENST00000631601 754 ntBASIC6.2□□□□□ -1.42
CAPN3P20807 AKAP17BP-201ENST00000431706 2719 ntBASIC6.2□□□□□ -1.42
CAPN3P20807 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.2□□□□□ -1.42
CAPN3P20807 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CAPN3P20807 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
CAPN3P20807 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CAPN3P20807 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CAPN3P20807 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.2□□□□□ -1.42
CAPN3P20807 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CAPN3P20807 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CAPN3P20807 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.2□□□□□ -1.42
CAPN3P20807 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CAPN3P20807 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CAPN3P20807 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CAPN3P20807 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CAPN3P20807 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CAPN3P20807 AC010401.2-201ENST00000575137 4934 ntBASIC6.2□□□□□ -1.42
CAPN3P20807 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.19□□□□□ -1.42
CAPN3P20807 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.19□□□□□ -1.42
CAPN3P20807 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CAPN3P20807 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
CAPN3P20807 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CAPN3P20807 CASC19-281ENST00000642118 1554 ntBASIC6.19□□□□□ -1.42
CAPN3P20807 AC097461.1-201ENST00000568928 2821 ntBASIC6.19□□□□□ -1.42
CAPN3P20807 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.19□□□□□ -1.42
CAPN3P20807 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.19□□□□□ -1.42
CAPN3P20807 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CAPN3P20807 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CAPN3P20807 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms