Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC090115.2-201ENST00000548060 883 ntBASIC7.79□□□□□ -1.16
HOXD8P13378 AC010198.2-201ENST00000550612 259 ntBASIC7.79□□□□□ -1.16
HOXD8P13378 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
HOXD8P13378 AC087465.1-201ENST00000560574 245 ntBASIC7.79□□□□□ -1.16
HOXD8P13378 HNRNPA1P74-201ENST00000560782 835 ntBASIC7.79□□□□□ -1.16
HOXD8P13378 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC7.79□□□□□ -1.16
HOXD8P13378 AC012417.1-201ENST00000582307 1039 ntBASIC7.79□□□□□ -1.16
HOXD8P13378 AC024267.2-201ENST00000582737 417 ntBASIC7.79□□□□□ -1.16
HOXD8P13378 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC7.79□□□□□ -1.16
HOXD8P13378 EIF4A2P1-201ENST00000587313 1063 ntBASIC7.79□□□□□ -1.16
HOXD8P13378 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC7.79□□□□□ -1.16
HOXD8P13378 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC7.79□□□□□ -1.16
HOXD8P13378 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.79□□□□□ -1.16
HOXD8P13378 AC079089.3-201ENST00000603094 673 ntBASIC7.79□□□□□ -1.16
HOXD8P13378 AC009779.8-202ENST00000607990 932 ntBASIC7.79□□□□□ -1.16
HOXD8P13378 AC012409.3-201ENST00000611343 981 ntBASIC7.79□□□□□ -1.16
HOXD8P13378 AC138749.5-201ENST00000611461 208 ntBASIC7.79□□□□□ -1.16
HOXD8P13378 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.79□□□□□ -1.16
HOXD8P13378 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HOXD8P13378 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC7.79□□□□□ -1.16
HOXD8P13378 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
HOXD8P13378 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HOXD8P13378 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.79□□□□□ -1.16
HOXD8P13378 AC020978.8-201ENST00000571975 3022 ntBASIC7.79□□□□□ -1.16
HOXD8P13378 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.79□□□□□ -1.16
HOXD8P13378 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
HOXD8P13378 CD86-209ENST00000493101 1572 ntTSL 2 BASIC7.79□□□□□ -1.16
HOXD8P13378 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
HOXD8P13378 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
HOXD8P13378 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
HOXD8P13378 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HOXD8P13378 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HOXD8P13378 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC7.78□□□□□ -1.16
HOXD8P13378 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC7.78□□□□□ -1.16
HOXD8P13378 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC7.78□□□□□ -1.16
HOXD8P13378 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HOXD8P13378 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.78□□□□□ -1.16
HOXD8P13378 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
HOXD8P13378 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
HOXD8P13378 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HOXD8P13378 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
HOXD8P13378 AL359715.3-201ENST00000569267 2123 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 SAMMSON-222ENST00000641901 2727 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HOXD8P13378 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HOXD8P13378 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
HOXD8P13378 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HOXD8P13378 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HOXD8P13378 Y_RNA.516-201ENST00000384541 124 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 RAB5CP1-201ENST00000395972 580 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 AL096711.1-201ENST00000404780 554 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 PRELID1P2-201ENST00000407805 396 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 RPL24P2-201ENST00000421023 475 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 MTCO2P34-201ENST00000421994 607 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.78□□□□□ -1.16
HOXD8P13378 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC7.78□□□□□ -1.16
HOXD8P13378 SDHCP3-201ENST00000445371 506 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HOXD8P13378 ELOCP23-201ENST00000452014 332 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 OR52E3P-201ENST00000452083 936 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 CCNB1IP1P3-201ENST00000454702 829 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 AC004890.1-201ENST00000461005 181 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 RPS26P11-201ENST00000463445 348 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 RN7SL390P-201ENST00000470634 284 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 RPS26P6-201ENST00000475156 348 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 AC022336.1-201ENST00000475510 337 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 AC021087.2-201ENST00000504656 1203 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HOXD8P13378 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
HOXD8P13378 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.78□□□□□ -1.16
HOXD8P13378 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.78□□□□□ -1.16
HOXD8P13378 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.78□□□□□ -1.16
HOXD8P13378 RNA5SP278-201ENST00000517055 102 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
HOXD8P13378 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC7.78□□□□□ -1.16
HOXD8P13378 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC7.78□□□□□ -1.16
HOXD8P13378 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC7.78□□□□□ -1.16
HOXD8P13378 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.78□□□□□ -1.16
HOXD8P13378 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.78□□□□□ -1.16
HOXD8P13378 NBEAP1-201ENST00000554452 979 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 AC136619.2-201ENST00000563361 631 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC7.78□□□□□ -1.16
HOXD8P13378 EIF1P4-201ENST00000572664 335 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 MIR3135A-201ENST00000578460 77 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC7.78□□□□□ -1.16
HOXD8P13378 RN7SL622P-201ENST00000585292 275 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.78□□□□□ -1.16
HOXD8P13378 AL136363.2-201ENST00000604173 851 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 AL049840.6-201ENST00000604583 345 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC7.78□□□□□ -1.16
HOXD8P13378 AC024941.1-201ENST00000612250 334 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC7.78□□□□□ -1.16
HOXD8P13378 OR1S1-201ENST00000624470 978 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 CLUHP10-201ENST00000631979 980 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC7.78□□□□□ -1.16
HOXD8P13378 AL132640.2-201ENST00000559968 1698 ntBASIC7.78□□□□□ -1.16
HOXD8P13378 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HOXD8P13378 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
HOXD8P13378 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.78□□□□□ -1.16
HOXD8P13378 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms