Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
TOP2AP11388 AL391262.1-201ENST00000556558 1992 ntBASIC10.11□□□□□ -0.79
TOP2AP11388 AC073429.2-201ENST00000569694 1444 ntBASIC10.11□□□□□ -0.79
TOP2AP11388 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
TOP2AP11388 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
TOP2AP11388 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
TOP2AP11388 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
TOP2AP11388 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
TOP2AP11388 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
TOP2AP11388 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC10.11□□□□□ -0.79
TOP2AP11388 AC137056.2-201ENST00000624055 1958 ntBASIC10.11□□□□□ -0.79
TOP2AP11388 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
TOP2AP11388 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
TOP2AP11388 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC10.11□□□□□ -0.79
TOP2AP11388 MIR133B-201ENST00000362210 119 ntBASIC10.11□□□□□ -0.79
TOP2AP11388 SSX3-202ENST00000376893 800 ntTSL 2 BASIC10.11□□□□□ -0.79
TOP2AP11388 MIR585-201ENST00000384887 94 ntBASIC10.11□□□□□ -0.79
TOP2AP11388 RPL23AP27-201ENST00000415161 451 ntBASIC10.11□□□□□ -0.79
TOP2AP11388 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
TOP2AP11388 AC108075.1-201ENST00000424692 529 ntBASIC10.11□□□□□ -0.79
TOP2AP11388 AC005033.1-201ENST00000428904 813 ntBASIC10.11□□□□□ -0.79
TOP2AP11388 AL731534.1-201ENST00000434711 269 ntBASIC10.11□□□□□ -0.79
TOP2AP11388 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC10.11□□□□□ -0.79
TOP2AP11388 CBX1P5-201ENST00000475330 559 ntBASIC10.11□□□□□ -0.79
TOP2AP11388 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
TOP2AP11388 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC10.11□□□□□ -0.79
TOP2AP11388 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC10.11□□□□□ -0.79
TOP2AP11388 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
TOP2AP11388 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC10.11□□□□□ -0.79
TOP2AP11388 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
TOP2AP11388 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
TOP2AP11388 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
TOP2AP11388 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
TOP2AP11388 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TOP2AP11388 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TOP2AP11388 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
TOP2AP11388 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
TOP2AP11388 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
TOP2AP11388 MFSD8-219ENST00000641228 2559 ntBASIC10.1□□□□□ -0.79
TOP2AP11388 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
TOP2AP11388 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
TOP2AP11388 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC10.1□□□□□ -0.79
TOP2AP11388 AC005042.1-201ENST00000393397 800 ntBASIC10.1□□□□□ -0.79
TOP2AP11388 RNU6ATAC18P-201ENST00000408413 101 ntBASIC10.1□□□□□ -0.79
TOP2AP11388 RMRPP5-201ENST00000411156 267 ntBASIC10.1□□□□□ -0.79
TOP2AP11388 TMA16P2-201ENST00000413187 601 ntBASIC10.1□□□□□ -0.79
TOP2AP11388 AL603882.1-201ENST00000463059 681 ntBASIC10.1□□□□□ -0.79
TOP2AP11388 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC10.1□□□□□ -0.79
TOP2AP11388 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC10.1□□□□□ -0.79
TOP2AP11388 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC10.1□□□□□ -0.79
TOP2AP11388 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC10.1□□□□□ -0.79
TOP2AP11388 AC000068.2-201ENST00000608816 460 ntBASIC10.1□□□□□ -0.79
TOP2AP11388 AC025574.2-201ENST00000615621 514 ntBASIC10.1□□□□□ -0.79
TOP2AP11388 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC10.1□□□□□ -0.79
TOP2AP11388 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
TOP2AP11388 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
TOP2AP11388 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
TOP2AP11388 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC10.1□□□□□ -0.79
TOP2AP11388 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC10.09□□□□□ -0.79
TOP2AP11388 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
TOP2AP11388 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TOP2AP11388 AL139805.2-201ENST00000455305 2433 ntBASIC10.09□□□□□ -0.79
TOP2AP11388 RNA5SP335-201ENST00000363817 110 ntBASIC10.09□□□□□ -0.79
TOP2AP11388 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TOP2AP11388 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC10.09□□□□□ -0.79
TOP2AP11388 AC016027.5-201ENST00000427227 210 ntBASIC10.09□□□□□ -0.79
TOP2AP11388 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC10.09□□□□□ -0.79
TOP2AP11388 RPS21P4-201ENST00000487122 248 ntBASIC10.09□□□□□ -0.79
TOP2AP11388 AC090638.1-201ENST00000498296 909 ntBASIC10.09□□□□□ -0.79
TOP2AP11388 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC10.09□□□□□ -0.79
TOP2AP11388 PGAM1P13-201ENST00000507497 754 ntBASIC10.09□□□□□ -0.79
TOP2AP11388 OR5D15P-201ENST00000531671 942 ntBASIC10.09□□□□□ -0.79
TOP2AP11388 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC10.09□□□□□ -0.79
TOP2AP11388 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
TOP2AP11388 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC10.09□□□□□ -0.79
TOP2AP11388 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TOP2AP11388 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
TOP2AP11388 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
TOP2AP11388 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TOP2AP11388 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC10.09□□□□□ -0.79
TOP2AP11388 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
TOP2AP11388 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
TOP2AP11388 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
TOP2AP11388 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC10.09□□□□□ -0.79
TOP2AP11388 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
TOP2AP11388 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC10.09□□□□□ -0.79
TOP2AP11388 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
TOP2AP11388 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC10.08□□□□□ -0.8
TOP2AP11388 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
TOP2AP11388 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC10.08□□□□□ -0.8
TOP2AP11388 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
TOP2AP11388 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
TOP2AP11388 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
TOP2AP11388 RPS6P23-201ENST00000413224 722 ntBASIC10.08□□□□□ -0.8
TOP2AP11388 AL353626.3-201ENST00000413399 657 ntBASIC10.08□□□□□ -0.8
TOP2AP11388 AC096775.1-201ENST00000437724 448 ntBASIC10.08□□□□□ -0.8
TOP2AP11388 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC10.08□□□□□ -0.8
TOP2AP11388 AC074255.1-201ENST00000511259 501 ntBASIC10.08□□□□□ -0.8
TOP2AP11388 Mico1.1-201ENST00000611698 204 ntBASIC10.08□□□□□ -0.8
TOP2AP11388 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms