Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL591167.1-201ENST00000607321 456 ntBASIC6.59□□□□□ -1.35
TPM1P09493 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.59□□□□□ -1.35
TPM1P09493 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC6.59□□□□□ -1.35
TPM1P09493 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.59□□□□□ -1.35
TPM1P09493 SNX18P12-201ENST00000624821 759 ntBASIC6.59□□□□□ -1.35
TPM1P09493 AC068213.1-201ENST00000625124 226 ntBASIC6.59□□□□□ -1.35
TPM1P09493 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.59□□□□□ -1.35
TPM1P09493 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.59□□□□□ -1.35
TPM1P09493 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TPM1P09493 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TPM1P09493 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.59□□□□□ -1.35
TPM1P09493 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
TPM1P09493 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
TPM1P09493 AC011416.1-201ENST00000514947 1732 ntBASIC6.59□□□□□ -1.36
TPM1P09493 AL034546.1-201ENST00000623740 3693 ntBASIC6.58□□□□□ -1.36
TPM1P09493 AC005261.6-201ENST00000623072 1387 ntBASIC6.58□□□□□ -1.36
TPM1P09493 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
TPM1P09493 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TPM1P09493 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TPM1P09493 RN7SKP81-201ENST00000365603 331 ntBASIC6.58□□□□□ -1.36
TPM1P09493 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
TPM1P09493 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.58□□□□□ -1.36
TPM1P09493 REREP1Y-201ENST00000422655 198 ntBASIC6.58□□□□□ -1.36
TPM1P09493 ELOBP4-201ENST00000423418 296 ntBASIC6.58□□□□□ -1.36
TPM1P09493 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.58□□□□□ -1.36
TPM1P09493 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.58□□□□□ -1.36
TPM1P09493 AC138761.5-201ENST00000433967 325 ntBASIC6.58□□□□□ -1.36
TPM1P09493 AC099670.2-201ENST00000435130 321 ntBASIC6.58□□□□□ -1.36
TPM1P09493 REREP2Y-201ENST00000439103 200 ntBASIC6.58□□□□□ -1.36
TPM1P09493 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.58□□□□□ -1.36
TPM1P09493 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.58□□□□□ -1.36
TPM1P09493 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TPM1P09493 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.58□□□□□ -1.36
TPM1P09493 HIGD1AP16-201ENST00000450986 258 ntBASIC6.58□□□□□ -1.36
TPM1P09493 RSU1P1-201ENST00000453416 441 ntBASIC6.58□□□□□ -1.36
TPM1P09493 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.58□□□□□ -1.36
TPM1P09493 RN7SL836P-201ENST00000476140 296 ntBASIC6.58□□□□□ -1.36
TPM1P09493 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.58□□□□□ -1.36
TPM1P09493 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TPM1P09493 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
TPM1P09493 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.58□□□□□ -1.36
TPM1P09493 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.58□□□□□ -1.36
TPM1P09493 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
TPM1P09493 AC037479.1-201ENST00000558361 625 ntBASIC6.58□□□□□ -1.36
TPM1P09493 AL163952.1-202ENST00000569625 600 ntBASIC6.58□□□□□ -1.36
TPM1P09493 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.58□□□□□ -1.36
TPM1P09493 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.58□□□□□ -1.36
TPM1P09493 AC022106.1-201ENST00000612834 766 ntBASIC6.58□□□□□ -1.36
TPM1P09493 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.58□□□□□ -1.36
TPM1P09493 AL353684.1-201ENST00000622677 1120 ntBASIC6.58□□□□□ -1.36
TPM1P09493 AC005618.4-201ENST00000625053 554 ntBASIC6.58□□□□□ -1.36
TPM1P09493 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.58□□□□□ -1.36
TPM1P09493 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.58□□□□□ -1.36
TPM1P09493 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.58□□□□□ -1.36
TPM1P09493 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TPM1P09493 FANCD2P2-201ENST00000437591 1400 ntBASIC6.58□□□□□ -1.36
TPM1P09493 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
TPM1P09493 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.58□□□□□ -1.36
TPM1P09493 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TPM1P09493 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.57□□□□□ -1.36
TPM1P09493 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TPM1P09493 AC005261.2-201ENST00000593427 4258 ntBASIC6.57□□□□□ -1.36
TPM1P09493 AC099654.3-201ENST00000447087 1546 ntBASIC6.57□□□□□ -1.36
TPM1P09493 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TPM1P09493 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TPM1P09493 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TPM1P09493 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TPM1P09493 OR10R3P-201ENST00000361688 942 ntBASIC6.57□□□□□ -1.36
TPM1P09493 RNU105B-201ENST00000364478 208 ntBASIC6.57□□□□□ -1.36
TPM1P09493 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.57□□□□□ -1.36
TPM1P09493 AC092634.1-201ENST00000366505 199 ntBASIC6.57□□□□□ -1.36
TPM1P09493 OR52N3P-201ENST00000413417 934 ntBASIC6.57□□□□□ -1.36
TPM1P09493 RPS15AP30-201ENST00000420976 390 ntBASIC6.57□□□□□ -1.36
TPM1P09493 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.57□□□□□ -1.36
TPM1P09493 AL158214.1-201ENST00000444423 404 ntBASIC6.57□□□□□ -1.36
TPM1P09493 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.57□□□□□ -1.36
TPM1P09493 NPM1P9-201ENST00000453156 844 ntBASIC6.57□□□□□ -1.36
TPM1P09493 AL133351.3-201ENST00000454998 193 ntBASIC6.57□□□□□ -1.36
TPM1P09493 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC6.57□□□□□ -1.36
TPM1P09493 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.57□□□□□ -1.36
TPM1P09493 AC105420.1-201ENST00000504389 582 ntBASIC6.57□□□□□ -1.36
TPM1P09493 ZNF322P1-201ENST00000568013 1209 ntBASIC6.57□□□□□ -1.36
TPM1P09493 AC019322.1-201ENST00000571869 389 ntBASIC6.57□□□□□ -1.36
TPM1P09493 OR7E19P-202ENST00000589942 844 ntBASIC6.57□□□□□ -1.36
TPM1P09493 AC119403.2-201ENST00000590960 598 ntBASIC6.57□□□□□ -1.36
TPM1P09493 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.57□□□□□ -1.36
TPM1P09493 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.57□□□□□ -1.36
TPM1P09493 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TPM1P09493 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TPM1P09493 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.57□□□□□ -1.36
TPM1P09493 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
TPM1P09493 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
TPM1P09493 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TPM1P09493 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TPM1P09493 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.57□□□□□ -1.36
TPM1P09493 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TPM1P09493 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TPM1P09493 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TPM1P09493 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TPM1P09493 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms