Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RETP07949 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RETP07949 AC062022.1-201ENST00000451026 1684 ntBASIC6.3□□□□□ -1.4
RETP07949 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RETP07949 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RETP07949 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RETP07949 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.3□□□□□ -1.4
RETP07949 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.3□□□□□ -1.4
RETP07949 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RETP07949 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RETP07949 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RETP07949 SNORA74A-201ENST00000364089 198 ntBASIC6.3□□□□□ -1.4
RETP07949 RNA5SP251-201ENST00000410614 137 ntBASIC6.3□□□□□ -1.4
RETP07949 AL035660.1-201ENST00000422041 222 ntBASIC6.3□□□□□ -1.4
RETP07949 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.3□□□□□ -1.4
RETP07949 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RETP07949 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.3□□□□□ -1.4
RETP07949 MGAT2P1-201ENST00000449718 797 ntBASIC6.3□□□□□ -1.4
RETP07949 AP006222.1-205ENST00000450734 457 ntBASIC6.3□□□□□ -1.4
RETP07949 RPL23AP68-201ENST00000480924 445 ntBASIC6.3□□□□□ -1.4
RETP07949 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.3□□□□□ -1.4
RETP07949 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.3□□□□□ -1.4
RETP07949 AC114781.3-201ENST00000512083 142 ntBASIC6.3□□□□□ -1.4
RETP07949 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.3□□□□□ -1.4
RETP07949 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.3□□□□□ -1.4
RETP07949 OOSP1P2-201ENST00000579644 351 ntBASIC6.3□□□□□ -1.4
RETP07949 MIR4433B-201ENST00000581329 102 ntBASIC6.3□□□□□ -1.4
RETP07949 RN7SL475P-201ENST00000583379 298 ntBASIC6.3□□□□□ -1.4
RETP07949 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.3□□□□□ -1.4
RETP07949 AC092944.2-201ENST00000605443 889 ntBASIC6.3□□□□□ -1.4
RETP07949 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.3□□□□□ -1.4
RETP07949 AC021422.1-201ENST00000621212 473 ntBASIC6.3□□□□□ -1.4
RETP07949 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.3□□□□□ -1.4
RETP07949 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RETP07949 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.3□□□□□ -1.4
RETP07949 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.3□□□□□ -1.4
RETP07949 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RETP07949 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RETP07949 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.3□□□□□ -1.4
RETP07949 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RETP07949 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RETP07949 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
RETP07949 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RETP07949 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RETP07949 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
RETP07949 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RETP07949 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RETP07949 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RETP07949 RNA5SP346-201ENST00000363541 121 ntBASIC6.29□□□□□ -1.4
RETP07949 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RETP07949 OR2W4P-201ENST00000406496 926 ntBASIC6.29□□□□□ -1.4
RETP07949 U3.43-201ENST00000410734 213 ntBASIC6.29□□□□□ -1.4
RETP07949 RPL23AP85-201ENST00000421838 433 ntBASIC6.29□□□□□ -1.4
RETP07949 AL157884.1-201ENST00000424561 454 ntBASIC6.29□□□□□ -1.4
RETP07949 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.29□□□□□ -1.4
RETP07949 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.29□□□□□ -1.4
RETP07949 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.29□□□□□ -1.4
RETP07949 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.29□□□□□ -1.4
RETP07949 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.29□□□□□ -1.4
RETP07949 SNX18P26-201ENST00000458433 740 ntBASIC6.29□□□□□ -1.4
RETP07949 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.29□□□□□ -1.4
RETP07949 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.29□□□□□ -1.4
RETP07949 UBFD1P1-201ENST00000473259 814 ntBASIC6.29□□□□□ -1.4
RETP07949 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.29□□□□□ -1.4
RETP07949 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.29□□□□□ -1.4
RETP07949 SCARNA18.1-201ENST00000516330 83 ntBASIC6.29□□□□□ -1.4
RETP07949 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.29□□□□□ -1.4
RETP07949 AP006245.2-201ENST00000522004 300 ntBASIC6.29□□□□□ -1.4
RETP07949 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
RETP07949 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.29□□□□□ -1.4
RETP07949 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RETP07949 AC091078.2-201ENST00000557145 559 ntBASIC6.29□□□□□ -1.4
RETP07949 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.29□□□□□ -1.4
RETP07949 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC6.29□□□□□ -1.4
RETP07949 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.29□□□□□ -1.4
RETP07949 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.29□□□□□ -1.4
RETP07949 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.29□□□□□ -1.4
RETP07949 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.29□□□□□ -1.4
RETP07949 AC108673.3-201ENST00000609183 335 ntBASIC6.29□□□□□ -1.4
RETP07949 AP000864.1-201ENST00000609424 650 ntBASIC6.29□□□□□ -1.4
RETP07949 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
RETP07949 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RETP07949 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
RETP07949 AC110373.1-201ENST00000505994 3505 ntBASIC6.29□□□□□ -1.4
RETP07949 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
RETP07949 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RETP07949 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.29□□□□□ -1.4
RETP07949 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.29□□□□□ -1.4
RETP07949 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RETP07949 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
RETP07949 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
RETP07949 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
RETP07949 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RETP07949 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RETP07949 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.28□□□□□ -1.4
RETP07949 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.28□□□□□ -1.4
RETP07949 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
RETP07949 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.28□□□□□ -1.4
RETP07949 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RETP07949 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms