Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RPL12P39-201ENST00000455456 496 ntBASIC4.98□□□□□ -1.61
CTSDP07339 RPS4XP17-201ENST00000479057 754 ntBASIC4.98□□□□□ -1.61
CTSDP07339 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC4.98□□□□□ -1.61
CTSDP07339 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.98□□□□□ -1.61
CTSDP07339 AC090424.1-201ENST00000535243 736 ntBASIC4.98□□□□□ -1.61
CTSDP07339 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC4.98□□□□□ -1.61
CTSDP07339 AL121594.2-201ENST00000541658 472 ntBASIC4.98□□□□□ -1.61
CTSDP07339 AC008055.1-201ENST00000547032 609 ntBASIC4.98□□□□□ -1.61
CTSDP07339 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC4.98□□□□□ -1.61
CTSDP07339 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CTSDP07339 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC4.98□□□□□ -1.61
CTSDP07339 DPPA3P2-202ENST00000557188 1219 ntBASIC4.98□□□□□ -1.61
CTSDP07339 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.98□□□□□ -1.61
CTSDP07339 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.98□□□□□ -1.61
CTSDP07339 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC4.98□□□□□ -1.61
CTSDP07339 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.98□□□□□ -1.61
CTSDP07339 AC015712.7-201ENST00000615211 635 ntBASIC4.98□□□□□ -1.61
CTSDP07339 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CTSDP07339 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTSDP07339 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTSDP07339 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.98□□□□□ -1.61
CTSDP07339 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.98□□□□□ -1.61
CTSDP07339 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CTSDP07339 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTSDP07339 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CTSDP07339 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
CTSDP07339 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC4.98□□□□□ -1.61
CTSDP07339 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTSDP07339 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC4.97□□□□□ -1.61
CTSDP07339 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTSDP07339 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CTSDP07339 AL133243.2-201ENST00000610331 1621 ntBASIC4.97□□□□□ -1.61
CTSDP07339 AC015689.2-201ENST00000528172 1738 ntBASIC4.97□□□□□ -1.61
CTSDP07339 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CTSDP07339 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.97□□□□□ -1.61
CTSDP07339 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CTSDP07339 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.97□□□□□ -1.61
CTSDP07339 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CTSDP07339 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CTSDP07339 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC4.97□□□□□ -1.61
CTSDP07339 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC4.97□□□□□ -1.61
CTSDP07339 AC005261.6-201ENST00000623072 1387 ntBASIC4.97□□□□□ -1.61
CTSDP07339 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTSDP07339 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CTSDP07339 DHFRP2-201ENST00000414224 547 ntBASIC4.97□□□□□ -1.61
CTSDP07339 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC4.97□□□□□ -1.61
CTSDP07339 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CTSDP07339 VTI1BP4-201ENST00000427516 527 ntBASIC4.97□□□□□ -1.61
CTSDP07339 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CTSDP07339 AC096632.2-201ENST00000438139 1239 ntBASIC4.97□□□□□ -1.61
CTSDP07339 NPM1P23-201ENST00000440193 849 ntBASIC4.97□□□□□ -1.61
CTSDP07339 WDR82P2-201ENST00000444540 928 ntBASIC4.97□□□□□ -1.61
CTSDP07339 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC4.97□□□□□ -1.61
CTSDP07339 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC4.97□□□□□ -1.61
CTSDP07339 SDC4P-201ENST00000453285 601 ntBASIC4.97□□□□□ -1.61
CTSDP07339 AL034369.1-201ENST00000453808 477 ntBASIC4.97□□□□□ -1.61
CTSDP07339 RN7SL502P-201ENST00000481857 290 ntBASIC4.97□□□□□ -1.61
CTSDP07339 RN7SL413P-201ENST00000482700 297 ntBASIC4.97□□□□□ -1.61
CTSDP07339 OR7E157P-201ENST00000494376 911 ntBASIC4.97□□□□□ -1.61
CTSDP07339 OR7E99P-201ENST00000505750 922 ntBASIC4.97□□□□□ -1.61
CTSDP07339 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
CTSDP07339 SNORA70.11-201ENST00000515987 138 ntBASIC4.97□□□□□ -1.61
CTSDP07339 SNORA70.13-201ENST00000516116 138 ntBASIC4.97□□□□□ -1.61
CTSDP07339 AC113191.1-201ENST00000517759 403 ntBASIC4.97□□□□□ -1.61
CTSDP07339 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.97□□□□□ -1.61
CTSDP07339 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTSDP07339 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.97□□□□□ -1.61
CTSDP07339 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.97□□□□□ -1.61
CTSDP07339 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.97□□□□□ -1.61
CTSDP07339 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTSDP07339 AC024267.2-201ENST00000582737 417 ntBASIC4.97□□□□□ -1.61
CTSDP07339 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC4.97□□□□□ -1.61
CTSDP07339 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC4.97□□□□□ -1.61
CTSDP07339 AL513327.3-201ENST00000602618 469 ntBASIC4.97□□□□□ -1.61
CTSDP07339 AL390877.1-201ENST00000605704 214 ntBASIC4.97□□□□□ -1.61
CTSDP07339 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC4.97□□□□□ -1.61
CTSDP07339 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC4.97□□□□□ -1.61
CTSDP07339 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.97□□□□□ -1.61
CTSDP07339 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTSDP07339 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTSDP07339 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CTSDP07339 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CTSDP07339 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CTSDP07339 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.97□□□□□ -1.61
CTSDP07339 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CTSDP07339 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CTSDP07339 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC4.96□□□□□ -1.61
CTSDP07339 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CTSDP07339 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CTSDP07339 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
CTSDP07339 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CTSDP07339 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CTSDP07339 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CTSDP07339 ADAM24P-201ENST00000398655 2101 ntBASIC4.96□□□□□ -1.62
CTSDP07339 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC4.96□□□□□ -1.62
CTSDP07339 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CTSDP07339 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CTSDP07339 TPT1-204ENST00000379060 764 ntTSL 5 BASIC4.96□□□□□ -1.62
CTSDP07339 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CTSDP07339 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms