Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RB1P06400 OR7E101P-201ENST00000400428 513 ntBASIC6.59□□□□□ -1.35
RB1P06400 NPM1P38-201ENST00000403835 865 ntBASIC6.59□□□□□ -1.35
RB1P06400 OR3A2-201ENST00000408891 1076 ntBASIC6.59□□□□□ -1.35
RB1P06400 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RB1P06400 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.59□□□□□ -1.35
RB1P06400 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.59□□□□□ -1.35
RB1P06400 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.59□□□□□ -1.35
RB1P06400 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RB1P06400 AC009237.1-201ENST00000442127 744 ntBASIC6.59□□□□□ -1.35
RB1P06400 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.59□□□□□ -1.35
RB1P06400 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.59□□□□□ -1.35
RB1P06400 AP002371.1-201ENST00000463604 433 ntBASIC6.59□□□□□ -1.35
RB1P06400 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC6.59□□□□□ -1.35
RB1P06400 CYCSP22-201ENST00000517555 339 ntBASIC6.59□□□□□ -1.35
RB1P06400 IGKV2-19-201ENST00000518132 283 ntBASIC6.59□□□□□ -1.35
RB1P06400 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.59□□□□□ -1.35
RB1P06400 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.59□□□□□ -1.35
RB1P06400 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RB1P06400 AC010547.6-201ENST00000571789 193 ntBASIC6.59□□□□□ -1.35
RB1P06400 AP001496.3-201ENST00000580230 913 ntBASIC6.59□□□□□ -1.35
RB1P06400 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC6.59□□□□□ -1.35
RB1P06400 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.59□□□□□ -1.35
RB1P06400 AC008536.1-201ENST00000602872 669 ntBASIC6.59□□□□□ -1.35
RB1P06400 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.59□□□□□ -1.35
RB1P06400 AL157762.1-201ENST00000619612 415 ntBASIC6.59□□□□□ -1.35
RB1P06400 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.59□□□□□ -1.35
RB1P06400 MAPK10-365ENST00000641902 3825 ntBASIC6.59□□□□□ -1.35
RB1P06400 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.59□□□□□ -1.35
RB1P06400 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
RB1P06400 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.59□□□□□ -1.35
RB1P06400 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
RB1P06400 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.59□□□□□ -1.35
RB1P06400 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.59□□□□□ -1.36
RB1P06400 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.59□□□□□ -1.36
RB1P06400 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
RB1P06400 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RB1P06400 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RB1P06400 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RB1P06400 FO082842.1-201ENST00000423552 1370 ntBASIC6.58□□□□□ -1.36
RB1P06400 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RB1P06400 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.58□□□□□ -1.36
RB1P06400 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RB1P06400 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.58□□□□□ -1.36
RB1P06400 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
RB1P06400 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
RB1P06400 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
RB1P06400 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
RB1P06400 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
RB1P06400 MIR105-2-201ENST00000385083 81 ntBASIC6.58□□□□□ -1.36
RB1P06400 AC240504.1-201ENST00000395709 845 ntBASIC6.58□□□□□ -1.36
RB1P06400 CASKP1-201ENST00000412870 582 ntBASIC6.58□□□□□ -1.36
RB1P06400 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.58□□□□□ -1.36
RB1P06400 RPL34P3-201ENST00000421454 338 ntBASIC6.58□□□□□ -1.36
RB1P06400 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.58□□□□□ -1.36
RB1P06400 FABP5P2-201ENST00000439042 408 ntBASIC6.58□□□□□ -1.36
RB1P06400 RANP2-201ENST00000456833 229 ntBASIC6.58□□□□□ -1.36
RB1P06400 SNX18P26-201ENST00000458433 740 ntBASIC6.58□□□□□ -1.36
RB1P06400 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.58□□□□□ -1.36
RB1P06400 AL133372.1-201ENST00000493565 745 ntBASIC6.58□□□□□ -1.36
RB1P06400 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.58□□□□□ -1.36
RB1P06400 RNU4-18P-201ENST00000516751 149 ntBASIC6.58□□□□□ -1.36
RB1P06400 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.58□□□□□ -1.36
RB1P06400 OR4A13P-201ENST00000529316 942 ntBASIC6.58□□□□□ -1.36
RB1P06400 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.58□□□□□ -1.36
RB1P06400 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.58□□□□□ -1.36
RB1P06400 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.58□□□□□ -1.36
RB1P06400 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC6.58□□□□□ -1.36
RB1P06400 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC6.58□□□□□ -1.36
RB1P06400 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.58□□□□□ -1.36
RB1P06400 AL589674.2-201ENST00000604304 337 ntBASIC6.58□□□□□ -1.36
RB1P06400 AL359704.2-201ENST00000604335 521 ntBASIC6.58□□□□□ -1.36
RB1P06400 SDR42E1P1-201ENST00000611327 477 ntBASIC6.58□□□□□ -1.36
RB1P06400 AC005899.7-201ENST00000618199 588 ntBASIC6.58□□□□□ -1.36
RB1P06400 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
RB1P06400 CLCA3P-203ENST00000490028 2781 ntBASIC6.58□□□□□ -1.36
RB1P06400 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
RB1P06400 AC027088.4-201ENST00000611559 1947 ntBASIC6.58□□□□□ -1.36
RB1P06400 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.58□□□□□ -1.36
RB1P06400 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.58□□□□□ -1.36
RB1P06400 AC127070.3-201ENST00000503695 3263 ntBASIC6.58□□□□□ -1.36
RB1P06400 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RB1P06400 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
RB1P06400 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RB1P06400 NEPNP-201ENST00000404786 1371 ntBASIC6.57□□□□□ -1.36
RB1P06400 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RB1P06400 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
RB1P06400 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
RB1P06400 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RB1P06400 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RB1P06400 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
RB1P06400 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
RB1P06400 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
RB1P06400 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RB1P06400 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.57□□□□□ -1.36
RB1P06400 GNL2P1-201ENST00000451274 2190 ntBASIC6.57□□□□□ -1.36
RB1P06400 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.57□□□□□ -1.36
RB1P06400 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RB1P06400 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
RB1P06400 MIR375-201ENST00000362103 64 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms