Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
COL5A2P05997 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
COL5A2P05997 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL5A2P05997 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.72□□□□□ -1.17
COL5A2P05997 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL5A2P05997 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
COL5A2P05997 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
COL5A2P05997 RNA5SP30-201ENST00000365552 115 ntBASIC7.72□□□□□ -1.17
COL5A2P05997 MIR223-201ENST00000385204 110 ntBASIC7.72□□□□□ -1.17
COL5A2P05997 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC7.72□□□□□ -1.17
COL5A2P05997 AC019185.1-201ENST00000442718 389 ntBASIC7.72□□□□□ -1.17
COL5A2P05997 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC7.72□□□□□ -1.17
COL5A2P05997 RPL7AP6-201ENST00000477943 801 ntBASIC7.72□□□□□ -1.17
COL5A2P05997 AC079841.1-201ENST00000481228 950 ntBASIC7.72□□□□□ -1.17
COL5A2P05997 AC004453.1-201ENST00000487895 408 ntBASIC7.72□□□□□ -1.17
COL5A2P05997 CDH12P4-201ENST00000517835 295 ntBASIC7.72□□□□□ -1.17
COL5A2P05997 CDH12P3-201ENST00000517935 295 ntBASIC7.72□□□□□ -1.17
COL5A2P05997 CDH12P1-201ENST00000518435 295 ntBASIC7.72□□□□□ -1.17
COL5A2P05997 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC7.72□□□□□ -1.17
COL5A2P05997 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC7.72□□□□□ -1.17
COL5A2P05997 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC7.72□□□□□ -1.17
COL5A2P05997 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.72□□□□□ -1.17
COL5A2P05997 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC7.72□□□□□ -1.17
COL5A2P05997 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC7.72□□□□□ -1.17
COL5A2P05997 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL5A2P05997 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.72□□□□□ -1.17
COL5A2P05997 AC022905.1-201ENST00000503430 3048 ntBASIC7.72□□□□□ -1.17
COL5A2P05997 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL5A2P05997 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.72□□□□□ -1.17
COL5A2P05997 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
COL5A2P05997 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
COL5A2P05997 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC7.71□□□□□ -1.17
COL5A2P05997 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
COL5A2P05997 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
COL5A2P05997 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
COL5A2P05997 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
COL5A2P05997 AL139805.2-201ENST00000455305 2433 ntBASIC7.71□□□□□ -1.17
COL5A2P05997 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
COL5A2P05997 EEF1A1P30-201ENST00000429708 1315 ntBASIC7.71□□□□□ -1.18
COL5A2P05997 AC136624.1-201ENST00000400791 413 ntBASIC7.71□□□□□ -1.18
COL5A2P05997 OR13K1P-201ENST00000444577 975 ntBASIC7.71□□□□□ -1.18
COL5A2P05997 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.71□□□□□ -1.18
COL5A2P05997 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
COL5A2P05997 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC7.71□□□□□ -1.18
COL5A2P05997 OR5D15P-201ENST00000531671 942 ntBASIC7.71□□□□□ -1.18
COL5A2P05997 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
COL5A2P05997 AC063977.5-201ENST00000601044 974 ntBASIC7.71□□□□□ -1.18
COL5A2P05997 AC010245.2-201ENST00000606908 1167 ntBASIC7.71□□□□□ -1.18
COL5A2P05997 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.71□□□□□ -1.18
COL5A2P05997 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.71□□□□□ -1.18
COL5A2P05997 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
COL5A2P05997 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.71□□□□□ -1.18
COL5A2P05997 AOX3P-204ENST00000491025 2107 ntBASIC7.71□□□□□ -1.18
COL5A2P05997 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
COL5A2P05997 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
COL5A2P05997 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.18
COL5A2P05997 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
COL5A2P05997 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
COL5A2P05997 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
COL5A2P05997 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.7□□□□□ -1.18
COL5A2P05997 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL5A2P05997 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL5A2P05997 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL5A2P05997 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
COL5A2P05997 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL5A2P05997 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
COL5A2P05997 RMRPP5-201ENST00000411156 267 ntBASIC7.7□□□□□ -1.18
COL5A2P05997 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.7□□□□□ -1.18
COL5A2P05997 OR52B5P-201ENST00000435337 951 ntBASIC7.7□□□□□ -1.18
COL5A2P05997 AC015983.1-201ENST00000441577 373 ntBASIC7.7□□□□□ -1.18
COL5A2P05997 LDHBP2-201ENST00000456969 1005 ntBASIC7.7□□□□□ -1.18
COL5A2P05997 AC087672.1-201ENST00000479876 766 ntBASIC7.7□□□□□ -1.18
COL5A2P05997 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC7.7□□□□□ -1.18
COL5A2P05997 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC7.7□□□□□ -1.18
COL5A2P05997 AC007494.1-201ENST00000562293 760 ntBASIC7.7□□□□□ -1.18
COL5A2P05997 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC7.7□□□□□ -1.18
COL5A2P05997 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC7.7□□□□□ -1.18
COL5A2P05997 OR52B5P-202ENST00000641118 1110 ntBASIC7.7□□□□□ -1.18
COL5A2P05997 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
COL5A2P05997 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
COL5A2P05997 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.7□□□□□ -1.18
COL5A2P05997 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.7□□□□□ -1.18
COL5A2P05997 AL355377.1-201ENST00000621125 1653 ntBASIC7.7□□□□□ -1.18
COL5A2P05997 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL5A2P05997 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.7□□□□□ -1.18
COL5A2P05997 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.7□□□□□ -1.18
COL5A2P05997 AL662795.2-201ENST00000624252 3706 ntBASIC7.7□□□□□ -1.18
COL5A2P05997 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL5A2P05997 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
COL5A2P05997 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
COL5A2P05997 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.69□□□□□ -1.18
COL5A2P05997 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.69□□□□□ -1.18
COL5A2P05997 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC7.69□□□□□ -1.18
COL5A2P05997 MYL6P5-201ENST00000412707 459 ntBASIC7.69□□□□□ -1.18
COL5A2P05997 NENFP1-201ENST00000419476 466 ntBASIC7.69□□□□□ -1.18
COL5A2P05997 VDAC2P4-201ENST00000452925 711 ntBASIC7.69□□□□□ -1.18
COL5A2P05997 AC026254.2-201ENST00000475295 371 ntBASIC7.69□□□□□ -1.18
COL5A2P05997 PGAM1P13-201ENST00000507497 754 ntBASIC7.69□□□□□ -1.18
COL5A2P05997 OR4A40P-201ENST00000533878 948 ntBASIC7.69□□□□□ -1.18
COL5A2P05997 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms