Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.56□□□□□ -1.52
P04436 WBP1LP3-201ENST00000523033 208 ntBASIC5.56□□□□□ -1.52
P04436 TRIM77BP-201ENST00000524985 1119 ntBASIC5.56□□□□□ -1.52
P04436 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
P04436 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
P04436 MIR4301-201ENST00000577203 66 ntBASIC5.56□□□□□ -1.52
P04436 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.56□□□□□ -1.52
P04436 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.56□□□□□ -1.52
P04436 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.56□□□□□ -1.52
P04436 AC020916.2-201ENST00000591242 360 ntBASIC5.56□□□□□ -1.52
P04436 AC107993.1-201ENST00000591343 684 ntBASIC5.56□□□□□ -1.52
P04436 AC015982.1-201ENST00000608113 465 ntBASIC5.56□□□□□ -1.52
P04436 AC096861.1-201ENST00000616652 240 ntBASIC5.56□□□□□ -1.52
P04436 SNORA11.6-201ENST00000619030 128 ntBASIC5.56□□□□□ -1.52
P04436 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.56□□□□□ -1.52
P04436 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.56□□□□□ -1.52
P04436 AC087269.2-201ENST00000641764 975 ntBASIC5.56□□□□□ -1.52
P04436 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.56□□□□□ -1.52
P04436 LINC01616-201ENST00000561816 2280 ntBASIC5.56□□□□□ -1.52
P04436 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
P04436 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
P04436 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.56□□□□□ -1.52
P04436 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.56□□□□□ -1.52
P04436 AC120036.2-201ENST00000509729 1474 ntBASIC5.56□□□□□ -1.52
P04436 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
P04436 GNL2P1-201ENST00000451274 2190 ntBASIC5.56□□□□□ -1.52
P04436 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
P04436 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
P04436 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
P04436 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.56□□□□□ -1.52
P04436 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
P04436 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
P04436 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
P04436 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
P04436 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
P04436 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
P04436 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
P04436 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
P04436 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.55□□□□□ -1.52
P04436 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC5.55□□□□□ -1.52
P04436 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
P04436 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
P04436 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
P04436 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
P04436 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
P04436 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.55□□□□□ -1.52
P04436 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.55□□□□□ -1.52
P04436 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
P04436 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
P04436 NPM1P38-201ENST00000403835 865 ntBASIC5.55□□□□□ -1.52
P04436 SNRPEP6-201ENST00000407465 277 ntBASIC5.55□□□□□ -1.52
P04436 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.55□□□□□ -1.52
P04436 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.55□□□□□ -1.52
P04436 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.55□□□□□ -1.52
P04436 AC066692.1-201ENST00000421721 457 ntBASIC5.55□□□□□ -1.52
P04436 AC245884.2-201ENST00000426257 404 ntBASIC5.55□□□□□ -1.52
P04436 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.55□□□□□ -1.52
P04436 AC079922.1-201ENST00000443291 359 ntBASIC5.55□□□□□ -1.52
P04436 RPS27AP3-201ENST00000453803 454 ntBASIC5.55□□□□□ -1.52
P04436 AC112187.1-201ENST00000455837 479 ntBASIC5.55□□□□□ -1.52
P04436 AC090589.1-201ENST00000473109 362 ntBASIC5.55□□□□□ -1.52
P04436 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.55□□□□□ -1.52
P04436 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.55□□□□□ -1.52
P04436 OR5H7P-201ENST00000514084 930 ntBASIC5.55□□□□□ -1.52
P04436 SETP21-201ENST00000514799 892 ntBASIC5.55□□□□□ -1.52
P04436 SCARNA18.1-201ENST00000516330 83 ntBASIC5.55□□□□□ -1.52
P04436 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.55□□□□□ -1.52
P04436 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.55□□□□□ -1.52
P04436 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.55□□□□□ -1.52
P04436 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.55□□□□□ -1.52
P04436 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.55□□□□□ -1.52
P04436 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.55□□□□□ -1.52
P04436 RNU4ATAC-201ENST00000580972 127 ntBASIC5.55□□□□□ -1.52
P04436 AC005244.1-201ENST00000582566 339 ntBASIC5.55□□□□□ -1.52
P04436 PRELID3BP3-201ENST00000584963 545 ntBASIC5.55□□□□□ -1.52
P04436 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.55□□□□□ -1.52
P04436 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.55□□□□□ -1.52
P04436 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.55□□□□□ -1.52
P04436 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.55□□□□□ -1.52
P04436 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
P04436 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
P04436 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
P04436 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.55□□□□□ -1.52
P04436 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
P04436 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
P04436 RBPJP7-201ENST00000442803 1447 ntBASIC5.55□□□□□ -1.52
P04436 RBPJP5-201ENST00000449433 1447 ntBASIC5.55□□□□□ -1.52
P04436 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.55□□□□□ -1.52
P04436 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
P04436 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
P04436 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.55□□□□□ -1.52
P04436 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
P04436 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
P04436 AC112243.1-201ENST00000623949 3851 ntBASIC5.54□□□□□ -1.52
P04436 WBP11P1-201ENST00000562560 1931 ntBASIC5.54□□□□□ -1.52
P04436 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.54□□□□□ -1.52
P04436 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
P04436 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
P04436 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
P04436 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms