Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 ATP5LP2-201ENST00000440646 311 ntBASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 AC097463.1-201ENST00000447288 481 ntBASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 PPIAP7-201ENST00000454070 489 ntBASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 AC023194.2-201ENST00000465398 406 ntBASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 RPL34P33-201ENST00000486062 334 ntBASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 CCNHP1-201ENST00000513311 678 ntBASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 RNA5SP400-201ENST00000517155 111 ntBASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 AP000620.1-201ENST00000527147 504 ntBASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 AC092332.1-201ENST00000563684 829 ntBASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 NCOA4P2-201ENST00000340589 1813 ntBASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 EIF3EP1-201ENST00000433978 1316 ntBASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 AL731532.1-201ENST00000623972 4236 ntBASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.66□□□□□ -1.5
NPIPA3F8WFD2 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 AL513548.1-201ENST00000562904 1724 ntBASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 AC005034.3-201ENST00000604845 1747 ntBASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 AL137141.1-201ENST00000624622 4836 ntBASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 OR7E25P-201ENST00000344844 931 ntBASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 RN7SKP121-201ENST00000410842 305 ntBASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 IPPKP1-201ENST00000422501 768 ntBASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 AL590399.4-201ENST00000436561 601 ntBASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 OR13K1P-201ENST00000444577 975 ntBASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 HIGD1AP16-201ENST00000450986 258 ntBASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 MORF4L2P1-201ENST00000503761 858 ntBASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 RNU6-751P-201ENST00000516382 101 ntBASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 AC110056.1-201ENST00000525759 911 ntBASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 AC079905.1-201ENST00000549280 475 ntBASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 MIR4701-201ENST00000583094 63 ntBASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 AL096712.1-201ENST00000614561 159 ntBASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 AC004801.6-201ENST00000616571 978 ntBASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 AC004836.1-201ENST00000623032 634 ntBASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.65□□□□□ -1.5
NPIPA3F8WFD2 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NPIPA3F8WFD2 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NPIPA3F8WFD2 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NPIPA3F8WFD2 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.65□□□□□ -1.51
NPIPA3F8WFD2 CDY11P-201ENST00000447168 1651 ntBASIC5.65□□□□□ -1.51
NPIPA3F8WFD2 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
NPIPA3F8WFD2 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
NPIPA3F8WFD2 AL354854.1-201ENST00000455940 1363 ntBASIC5.65□□□□□ -1.51
NPIPA3F8WFD2 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.65□□□□□ -1.51
NPIPA3F8WFD2 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.65□□□□□ -1.51
NPIPA3F8WFD2 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NPIPA3F8WFD2 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
NPIPA3F8WFD2 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
NPIPA3F8WFD2 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.65□□□□□ -1.51
NPIPA3F8WFD2 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
NPIPA3F8WFD2 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA3F8WFD2 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms