Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
TMEM88BA6NKF7 ARG1-202ENST00000356962 1468 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
TMEM88BA6NKF7 AL353743.3-201ENST00000442109 1468 ntBASIC8.21□□□□□ -1.09
TMEM88BA6NKF7 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC8.21□□□□□ -1.09
TMEM88BA6NKF7 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.09
TMEM88BA6NKF7 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
TMEM88BA6NKF7 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 METTL21EP-201ENST00000298105 713 ntBASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 Y_RNA.51-201ENST00000362725 102 ntBASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 AL672167.2-201ENST00000377164 879 ntBASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 MIR188-201ENST00000385034 86 ntBASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 AL590635.1-201ENST00000406314 586 ntBASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 RN7SKP166-201ENST00000410812 305 ntBASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 MRPS21P5-201ENST00000417885 231 ntBASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 AC011233.1-201ENST00000422812 283 ntBASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 AL359076.1-201ENST00000426860 420 ntTSL 3 BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 YWHAZP7-201ENST00000436906 631 ntBASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 ISCA1P2-201ENST00000438679 421 ntBASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 AC010240.2-201ENST00000445363 1205 ntBASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 SEPT10P1-201ENST00000517342 1162 ntBASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 RGS5-220ENST00000528689 566 ntTSL 5 BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 FCF1-203ENST00000553615 954 ntTSL 3 BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 AC048383.1-201ENST00000558226 527 ntTSL 4 BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 AL031281.1-201ENST00000604049 488 ntBASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 HNRNPA3P9-201ENST00000604913 979 ntBASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 AC063962.1-201ENST00000608199 521 ntBASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 AL133243.1-201ENST00000614487 366 ntBASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 GRHL1-201ENST00000324907 3563 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 EEF1A1P33-201ENST00000554413 1362 ntBASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 AC127459.1-201ENST00000563129 2768 ntBASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 MAPK10-343ENST00000641677 2546 ntBASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
TMEM88BA6NKF7 TRPS1-209ENST00000519674 3116 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 AC007406.5-201ENST00000570140 3170 ntBASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 GMFG-201ENST00000253054 616 ntTSL 5 BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 U3.18-201ENST00000390880 216 ntBASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 RNU6-1055P-201ENST00000391085 107 ntBASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 HMGN1P20-201ENST00000411849 300 ntBASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 RPS3AP44-201ENST00000425466 790 ntBASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 CNOT7P1-201ENST00000429006 852 ntBASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 MOB1AP1-201ENST00000430903 535 ntBASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 AL365220.1-201ENST00000432923 399 ntBASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 MTND1P32-201ENST00000433043 938 ntBASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 AC104698.1-201ENST00000435671 276 ntBASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 RPL5P7-201ENST00000444235 813 ntBASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 RN7SL39P-201ENST00000462264 297 ntBASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 RPL23AP8-201ENST00000479812 475 ntBASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 LAMTOR3P2-201ENST00000504479 232 ntBASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms