Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 AL442128.2-201ENST00000620246 1824 ntBASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 AC096921.2-201ENST00000561507 1916 ntBASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DRB4X5D2U9 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 AL359091.1-201ENST00000449048 1734 ntBASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 USP9YP3-201ENST00000434481 1766 ntBASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 RNU1-49P-201ENST00000363468 159 ntBASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 RN7SKP81-201ENST00000365603 331 ntBASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 AL157702.1-201ENST00000398764 426 ntBASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 RPS7P14-201ENST00000426405 583 ntBASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 OR3D1P-201ENST00000438288 955 ntBASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 HIGD1AP16-201ENST00000450986 258 ntBASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 AL133351.3-201ENST00000454998 193 ntBASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 AL022319.1-201ENST00000458183 1167 ntBASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 OR6M2P-201ENST00000529831 871 ntBASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 AC005632.2-201ENST00000564271 828 ntBASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 ARGFXP2-201ENST00000579304 949 ntBASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 GLYATL1P2-202ENST00000588046 902 ntBASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 LSM1P2-201ENST00000604911 322 ntBASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 HTR1DP1-201ENST00000616500 888 ntBASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 MIR6823-201ENST00000622118 61 ntBASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 HDAC1P2-201ENST00000453661 1398 ntBASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DRB4X5D2U9 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
HLA-DRB4X5D2U9 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DRB4X5D2U9 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DRB4X5D2U9 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DRB4X5D2U9 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DRB4X5D2U9 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
HLA-DRB4X5D2U9 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DRB4X5D2U9 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
HLA-DRB4X5D2U9 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DRB4X5D2U9 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DRB4X5D2U9 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DRB4X5D2U9 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DRB4X5D2U9 SNORD1C-201ENST00000363315 78 ntBASIC4.6□□□□□ -1.67
HLA-DRB4X5D2U9 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DRB4X5D2U9 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DRB4X5D2U9 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HLA-DRB4X5D2U9 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DRB4X5D2U9 AL158827.1-201ENST00000416300 391 ntBASIC4.6□□□□□ -1.67
HLA-DRB4X5D2U9 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DRB4X5D2U9 AC117434.1-201ENST00000419971 836 ntBASIC4.6□□□□□ -1.67
HLA-DRB4X5D2U9 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms