Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AL031985.1-201ENST00000392713 418 ntBASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 AC007568.1-201ENST00000422912 471 ntBASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 RPS7P14-201ENST00000426405 583 ntBASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 CDY8P-201ENST00000428380 1279 ntBASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 RPL34P27-201ENST00000428810 349 ntBASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 AL161722.1-201ENST00000446972 1032 ntBASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 CDY20P-201ENST00000447528 1279 ntBASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 RN7SL101P-201ENST00000496350 279 ntBASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 AC091965.3-201ENST00000506236 208 ntBASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 MTATP6P1-201ENST00000514057 681 ntBASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 OR5H7P-201ENST00000514084 930 ntBASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 OR7E158P-201ENST00000524483 910 ntBASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 AP001804.1-201ENST00000526868 919 ntBASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 AC027243.2-201ENST00000602530 724 ntBASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 AC091305.2-201ENST00000624049 1576 ntBASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 AL451046.1-201ENST00000406097 534 ntBASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 AL512422.1-201ENST00000407033 553 ntBASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 AL023284.3-201ENST00000407767 334 ntBASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 RPL12P16-201ENST00000431098 498 ntBASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 AC106800.3-201ENST00000511389 308 ntBASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 AC007956.1-201ENST00000555623 542 ntBASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 AC011445.2-201ENST00000599274 173 ntBASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 AC068768.2-201ENST00000602352 343 ntBASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 AC103703.1-201ENST00000634783 663 ntBASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 AL133243.2-201ENST00000610331 1621 ntBASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 AC093297.3-201ENST00000607056 2517 ntBASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 SAMMSON-210ENST00000641260 1308 ntBASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.23□□□□□ -1.41
TM9SF3Q9HD45 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TM9SF3Q9HD45 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TM9SF3Q9HD45 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.22□□□□□ -1.41
TM9SF3Q9HD45 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TM9SF3Q9HD45 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
TM9SF3Q9HD45 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TM9SF3Q9HD45 AC119674.1-213ENST00000641177 1386 ntBASIC6.22□□□□□ -1.41
TM9SF3Q9HD45 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.22□□□□□ -1.41
TM9SF3Q9HD45 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TM9SF3Q9HD45 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TM9SF3Q9HD45 RN7SKP81-201ENST00000365603 331 ntBASIC6.22□□□□□ -1.41
TM9SF3Q9HD45 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.22□□□□□ -1.41
TM9SF3Q9HD45 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
TM9SF3Q9HD45 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.22□□□□□ -1.41
TM9SF3Q9HD45 AC097721.1-201ENST00000427150 1253 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms