Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.16□□□□□ -1.26
FOXP3Q9BZS1 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
FOXP3Q9BZS1 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
FOXP3Q9BZS1 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
FOXP3Q9BZS1 AC126474.2-201ENST00000623268 1750 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 RNA5SP472-201ENST00000363868 119 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AL451061.1-201ENST00000407887 862 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 RNU4-22P-201ENST00000411058 166 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AC017035.1-201ENST00000411999 1115 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AL449283.1-202ENST00000418249 604 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AC005345.1-201ENST00000431868 217 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 RPL29P7-201ENST00000440227 457 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AC073052.1-201ENST00000440417 714 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 DBIL5P2-201ENST00000443827 253 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 RPL31P20-201ENST00000449593 360 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AL133217.1-201ENST00000450980 425 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AC073476.1-201ENST00000452854 407 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 RPSAP24-201ENST00000461543 873 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 RN7SL392P-201ENST00000473024 299 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AC079594.1-201ENST00000489757 331 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AC107401.1-201ENST00000503426 685 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 MRPS5P3-201ENST00000515577 166 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 BUD31P1-201ENST00000521828 359 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AC130366.1-201ENST00000526505 1192 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AC004923.2-201ENST00000529649 369 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AP000662.1-201ENST00000530952 487 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 NDUFA3P2-201ENST00000531434 232 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AC096708.2-201ENST00000577676 512 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AC002069.2-201ENST00000603580 883 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 Z82195.1-201ENST00000604558 398 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 AC098679.5-201ENST00000624394 571 ntBASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
FOXP3Q9BZS1 CREM-216ENST00000429130 1476 ntTSL 5 BASIC7.15□□□□□ -1.27
FOXP3Q9BZS1 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
FOXP3Q9BZS1 AC053481.2-202ENST00000582394 1500 ntBASIC7.15□□□□□ -1.27
FOXP3Q9BZS1 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
FOXP3Q9BZS1 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
FOXP3Q9BZS1 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC7.15□□□□□ -1.27
FOXP3Q9BZS1 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
FOXP3Q9BZS1 BRD7P1-201ENST00000557705 1915 ntBASIC7.15□□□□□ -1.27
FOXP3Q9BZS1 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
FOXP3Q9BZS1 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
FOXP3Q9BZS1 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
FOXP3Q9BZS1 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
FOXP3Q9BZS1 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.15□□□□□ -1.27
FOXP3Q9BZS1 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
FOXP3Q9BZS1 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
FOXP3Q9BZS1 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
FOXP3Q9BZS1 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
FOXP3Q9BZS1 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
FOXP3Q9BZS1 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
FOXP3Q9BZS1 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
FOXP3Q9BZS1 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
FOXP3Q9BZS1 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.14□□□□□ -1.27
FOXP3Q9BZS1 AMELX-201ENST00000348912 737 ntTSL 5 BASIC7.14□□□□□ -1.27
FOXP3Q9BZS1 RNU4-68P-201ENST00000364314 141 ntBASIC7.14□□□□□ -1.27
FOXP3Q9BZS1 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
FOXP3Q9BZS1 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
FOXP3Q9BZS1 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
FOXP3Q9BZS1 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
FOXP3Q9BZS1 ST13P16-201ENST00000401760 781 ntBASIC7.14□□□□□ -1.27
FOXP3Q9BZS1 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms