Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 DUXAP6-201ENST00000553858 601 ntBASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 AC061975.8-201ENST00000587058 721 ntBASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 AC036176.3-201ENST00000602456 418 ntBASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 AC012213.4-201ENST00000606457 354 ntBASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 AC108865.2-201ENST00000606881 432 ntBASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 AC090425.2-201ENST00000608818 501 ntBASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 AC092106.3-201ENST00000611308 722 ntBASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 AL138693.1-201ENST00000622219 129 ntBASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 AC104985.3-201ENST00000623479 597 ntBASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 CLUHP10-201ENST00000631979 980 ntBASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.71□□□□□ -1.34
TRIM48Q8IWZ4 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 RNA5SP382-201ENST00000363355 112 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 RN7SKP130-201ENST00000364924 301 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AC092634.1-201ENST00000366505 199 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 MIR551B-201ENST00000384984 96 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 ATF1P1-201ENST00000406040 927 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 GAPDHP57-201ENST00000424400 585 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AHCYP8-201ENST00000425108 209 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AP003385.1-201ENST00000426387 893 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 BX119321.1-201ENST00000428912 797 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 MORF4L1P5-201ENST00000433352 961 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 RAB9AP5-201ENST00000437794 597 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 HMGN1P6-201ENST00000438508 291 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 HMGN1P32-201ENST00000441744 256 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 RAB9AP2-201ENST00000443911 597 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 RPL6P5-201ENST00000445678 828 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AL390728.3-201ENST00000452704 270 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 ART2BP-201ENST00000453501 499 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 NMNAT1P3-201ENST00000457517 888 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 RPSAP37-201ENST00000470913 821 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 RN7SL612P-201ENST00000497704 295 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 MINOS1P4-201ENST00000515470 318 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AC093878.1-201ENST00000515630 432 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 OR4A40P-201ENST00000533878 948 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 MTND4P33-201ENST00000556706 766 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AC073137.1-201ENST00000605636 634 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AC026951.2-201ENST00000613847 241 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AC244100.4-201ENST00000617747 388 ntBASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM48Q8IWZ4 AC022079.2-201ENST00000619739 566 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms