Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 OR2AT2P-201ENST00000413438 905 ntBASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 UBE2V1P14-201ENST00000415815 558 ntBASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 AC093155.2-201ENST00000420734 937 ntBASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 NFYAP1-201ENST00000431953 972 ntBASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 AC016027.4-201ENST00000450866 277 ntBASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 AC090589.1-201ENST00000473109 362 ntBASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 AC114728.1-201ENST00000488289 483 ntBASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 AC097467.4-201ENST00000605504 141 ntBASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 AL691477.1-201ENST00000624398 162 ntBASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 MIPEPP2-201ENST00000422560 1819 ntBASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 CTAGE11P-201ENST00000451540 2353 ntBASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 TET1P1-201ENST00000426627 2301 ntBASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.03□□□□□ -1.44
LYSMD4Q5XG99 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
LYSMD4Q5XG99 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 SALL4P7-201ENST00000555779 3120 ntBASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 RN7SKP160-201ENST00000363804 340 ntBASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 AL163193.1-201ENST00000444895 788 ntBASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 AC002486.2-201ENST00000447806 590 ntBASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 RN7SL269P-201ENST00000467795 305 ntBASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 RN7SL466P-201ENST00000497546 295 ntBASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 AC109481.1-201ENST00000509173 282 ntBASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 AC106800.2-201ENST00000514009 1103 ntBASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 RNA5SP400-201ENST00000517155 111 ntBASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 OR56A7P-201ENST00000524865 941 ntBASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 AC233702.7-202ENST00000582941 211 ntBASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.02□□□□□ -1.45
LYSMD4Q5XG99 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms