Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC003985.2-201ENST00000562268 1669 ntBASIC6.58□□□□□ -1.36
CCDC38Q502W7 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CCDC38Q502W7 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC38Q502W7 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC38Q502W7 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC38Q502W7 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC38Q502W7 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC38Q502W7 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC38Q502W7 GTF2IP4-201ENST00000453092 2054 ntBASIC6.58□□□□□ -1.36
CCDC38Q502W7 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CCDC38Q502W7 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.58□□□□□ -1.36
CCDC38Q502W7 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC38Q502W7 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.58□□□□□ -1.36
CCDC38Q502W7 RNA5SP140-201ENST00000364524 92 ntBASIC6.58□□□□□ -1.36
CCDC38Q502W7 MIR421-201ENST00000365696 85 ntBASIC6.58□□□□□ -1.36
CCDC38Q502W7 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC38Q502W7 CCNB2P1-201ENST00000399411 1150 ntBASIC6.58□□□□□ -1.36
CCDC38Q502W7 FDPSP5-201ENST00000399474 1057 ntBASIC6.58□□□□□ -1.36
CCDC38Q502W7 AL353133.1-201ENST00000407695 401 ntBASIC6.58□□□□□ -1.36
CCDC38Q502W7 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC38Q502W7 AC009506.2-201ENST00000420635 840 ntBASIC6.58□□□□□ -1.36
CCDC38Q502W7 AC006509.1-201ENST00000420788 634 ntBASIC6.58□□□□□ -1.36
CCDC38Q502W7 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC38Q502W7 AL691517.1-201ENST00000440833 1235 ntBASIC6.58□□□□□ -1.36
CCDC38Q502W7 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC38Q502W7 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC38Q502W7 AL079303.1-201ENST00000486611 463 ntBASIC6.58□□□□□ -1.36
CCDC38Q502W7 RN7SL350P-201ENST00000492591 299 ntBASIC6.58□□□□□ -1.36
CCDC38Q502W7 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC38Q502W7 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC38Q502W7 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC38Q502W7 SETP12-201ENST00000514068 805 ntBASIC6.58□□□□□ -1.36
CCDC38Q502W7 SCARNA5-201ENST00000516201 276 ntBASIC6.58□□□□□ -1.36
CCDC38Q502W7 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC38Q502W7 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC38Q502W7 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC38Q502W7 AC092868.3-201ENST00000560515 784 ntBASIC6.58□□□□□ -1.36
CCDC38Q502W7 AC007494.1-201ENST00000562293 760 ntBASIC6.58□□□□□ -1.36
CCDC38Q502W7 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC38Q502W7 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.58□□□□□ -1.36
CCDC38Q502W7 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC38Q502W7 RPL29P33-201ENST00000587474 316 ntBASIC6.58□□□□□ -1.36
CCDC38Q502W7 MIMT1-201ENST00000597105 1050 ntBASIC6.58□□□□□ -1.36
CCDC38Q502W7 AC067838.1-201ENST00000606064 577 ntBASIC6.58□□□□□ -1.36
CCDC38Q502W7 AC005972.3-201ENST00000606304 481 ntBASIC6.58□□□□□ -1.36
CCDC38Q502W7 AC093388.1-201ENST00000609166 430 ntBASIC6.58□□□□□ -1.36
CCDC38Q502W7 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CCDC38Q502W7 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
CCDC38Q502W7 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
CCDC38Q502W7 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
CCDC38Q502W7 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC38Q502W7 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC38Q502W7 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CCDC38Q502W7 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC38Q502W7 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC38Q502W7 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CCDC38Q502W7 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC38Q502W7 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CCDC38Q502W7 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC38Q502W7 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CCDC38Q502W7 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC38Q502W7 BIN2P1-201ENST00000504996 1530 ntBASIC6.57□□□□□ -1.36
CCDC38Q502W7 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CCDC38Q502W7 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC38Q502W7 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC38Q502W7 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CCDC38Q502W7 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CCDC38Q502W7 OR13C3-201ENST00000374781 1108 ntBASIC6.57□□□□□ -1.36
CCDC38Q502W7 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC38Q502W7 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CCDC38Q502W7 ZNF37CP-201ENST00000406795 241 ntBASIC6.57□□□□□ -1.36
CCDC38Q502W7 UBE2V1P15-201ENST00000407776 448 ntBASIC6.57□□□□□ -1.36
CCDC38Q502W7 U3.43-201ENST00000410734 213 ntBASIC6.57□□□□□ -1.36
CCDC38Q502W7 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CCDC38Q502W7 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC38Q502W7 RPL5P2-201ENST00000429598 854 ntBASIC6.57□□□□□ -1.36
CCDC38Q502W7 SNRPFP2-201ENST00000440710 251 ntBASIC6.57□□□□□ -1.36
CCDC38Q502W7 HMGN1P32-201ENST00000441744 256 ntBASIC6.57□□□□□ -1.36
CCDC38Q502W7 BMS1P11-201ENST00000442351 885 ntBASIC6.57□□□□□ -1.36
CCDC38Q502W7 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC38Q502W7 AC022080.2-201ENST00000452932 533 ntBASIC6.57□□□□□ -1.36
CCDC38Q502W7 BMS1P9-201ENST00000457640 885 ntBASIC6.57□□□□□ -1.36
CCDC38Q502W7 snoU13.29-201ENST00000459370 104 ntBASIC6.57□□□□□ -1.36
CCDC38Q502W7 AC104629.2-201ENST00000468627 598 ntBASIC6.57□□□□□ -1.36
CCDC38Q502W7 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC38Q502W7 AC097486.1-201ENST00000515331 210 ntBASIC6.57□□□□□ -1.36
CCDC38Q502W7 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CCDC38Q502W7 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC38Q502W7 AP001804.2-201ENST00000533932 910 ntBASIC6.57□□□□□ -1.36
CCDC38Q502W7 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
CCDC38Q502W7 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC38Q502W7 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC38Q502W7 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC38Q502W7 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.57□□□□□ -1.36
CCDC38Q502W7 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.57□□□□□ -1.36
CCDC38Q502W7 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC38Q502W7 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC38Q502W7 AC106730.3-201ENST00000624568 641 ntBASIC6.57□□□□□ -1.36
CCDC38Q502W7 AC099654.15-201ENST00000639802 509 ntBASIC6.57□□□□□ -1.36
CCDC38Q502W7 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms