Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 AL512637.1-201ENST00000439523 1231 ntBASIC7.29□□□□□ -1.24
RFX7Q2KHR2 SDC4P-201ENST00000453285 601 ntBASIC7.29□□□□□ -1.24
RFX7Q2KHR2 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 OR7E158P-201ENST00000524483 910 ntBASIC7.29□□□□□ -1.24
RFX7Q2KHR2 OR56A7P-201ENST00000524865 941 ntBASIC7.29□□□□□ -1.24
RFX7Q2KHR2 AP000648.1-201ENST00000529682 397 ntBASIC7.29□□□□□ -1.24
RFX7Q2KHR2 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 AC092121.1-201ENST00000569452 202 ntBASIC7.29□□□□□ -1.24
RFX7Q2KHR2 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 AC011445.2-201ENST00000599274 173 ntBASIC7.29□□□□□ -1.24
RFX7Q2KHR2 AL031601.1-201ENST00000605702 394 ntBASIC7.29□□□□□ -1.24
RFX7Q2KHR2 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC7.29□□□□□ -1.24
RFX7Q2KHR2 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RFX7Q2KHR2 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC7.28□□□□□ -1.24
RFX7Q2KHR2 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
RFX7Q2KHR2 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.28□□□□□ -1.24
RFX7Q2KHR2 THAP12P9-201ENST00000503971 2360 ntBASIC7.28□□□□□ -1.24
RFX7Q2KHR2 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.28□□□□□ -1.24
RFX7Q2KHR2 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
RFX7Q2KHR2 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
RFX7Q2KHR2 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
RFX7Q2KHR2 RPL23AP17-201ENST00000401064 499 ntBASIC7.28□□□□□ -1.24
RFX7Q2KHR2 MTND4LP17-201ENST00000414607 293 ntBASIC7.28□□□□□ -1.24
RFX7Q2KHR2 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.28□□□□□ -1.24
RFX7Q2KHR2 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC7.28□□□□□ -1.24
RFX7Q2KHR2 KIF4CP-201ENST00000422742 1279 ntBASIC7.28□□□□□ -1.24
RFX7Q2KHR2 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.28□□□□□ -1.24
RFX7Q2KHR2 RN7SL269P-201ENST00000467795 305 ntBASIC7.28□□□□□ -1.24
RFX7Q2KHR2 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC7.28□□□□□ -1.24
RFX7Q2KHR2 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
RFX7Q2KHR2 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC7.28□□□□□ -1.24
RFX7Q2KHR2 OR7A1P-201ENST00000601206 970 ntBASIC7.28□□□□□ -1.24
RFX7Q2KHR2 AC009237.12-201ENST00000604755 742 ntBASIC7.28□□□□□ -1.24
RFX7Q2KHR2 MIR6768-201ENST00000610734 72 ntBASIC7.28□□□□□ -1.24
RFX7Q2KHR2 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RFX7Q2KHR2 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.28□□□□□ -1.24
RFX7Q2KHR2 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RFX7Q2KHR2 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RFX7Q2KHR2 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
RFX7Q2KHR2 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.28□□□□□ -1.24
RFX7Q2KHR2 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
RFX7Q2KHR2 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.24
RFX7Q2KHR2 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
RFX7Q2KHR2 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
RFX7Q2KHR2 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RFX7Q2KHR2 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RFX7Q2KHR2 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
RFX7Q2KHR2 RN7SKP81-201ENST00000365603 331 ntBASIC7.27□□□□□ -1.25
RFX7Q2KHR2 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.27□□□□□ -1.25
RFX7Q2KHR2 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC7.27□□□□□ -1.25
RFX7Q2KHR2 BX323845.3-201ENST00000428215 527 ntBASIC7.27□□□□□ -1.25
RFX7Q2KHR2 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.27□□□□□ -1.25
RFX7Q2KHR2 AP000281.1-201ENST00000444036 316 ntBASIC7.27□□□□□ -1.25
RFX7Q2KHR2 AC092865.4-201ENST00000477936 615 ntBASIC7.27□□□□□ -1.25
RFX7Q2KHR2 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RFX7Q2KHR2 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.27□□□□□ -1.25
RFX7Q2KHR2 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.27□□□□□ -1.25
RFX7Q2KHR2 AC005244.1-201ENST00000582566 339 ntBASIC7.27□□□□□ -1.25
RFX7Q2KHR2 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.27□□□□□ -1.25
RFX7Q2KHR2 AL136131.3-201ENST00000607600 188 ntBASIC7.27□□□□□ -1.25
RFX7Q2KHR2 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
RFX7Q2KHR2 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.27□□□□□ -1.25
RFX7Q2KHR2 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
RFX7Q2KHR2 AC012254.3-201ENST00000591183 2117 ntBASIC7.27□□□□□ -1.25
RFX7Q2KHR2 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RFX7Q2KHR2 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RFX7Q2KHR2 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 AL117339.4-201ENST00000608335 7063 ntBASIC7.26□□□□□ -1.25
RFX7Q2KHR2 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 RNA5SP375-201ENST00000362975 119 ntBASIC7.26□□□□□ -1.25
RFX7Q2KHR2 AL451142.1-201ENST00000375867 775 ntBASIC7.26□□□□□ -1.25
RFX7Q2KHR2 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 AL121977.1-201ENST00000401636 979 ntBASIC7.26□□□□□ -1.25
RFX7Q2KHR2 RPS26P38-201ENST00000414476 348 ntBASIC7.26□□□□□ -1.25
RFX7Q2KHR2 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 AC023245.1-201ENST00000468501 517 ntBASIC7.26□□□□□ -1.25
RFX7Q2KHR2 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 CCDC11P1-201ENST00000503137 1162 ntBASIC7.26□□□□□ -1.25
RFX7Q2KHR2 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 AC110056.1-201ENST00000525759 911 ntBASIC7.26□□□□□ -1.25
RFX7Q2KHR2 OR4A42P-201ENST00000531397 938 ntBASIC7.26□□□□□ -1.25
RFX7Q2KHR2 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms