Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC138749.2-201ENST00000566048 167 ntBASIC7.2□□□□□ -1.26
PCDH1Q08174 AC136944.5-201ENST00000573021 151 ntBASIC7.2□□□□□ -1.26
PCDH1Q08174 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDH1Q08174 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDH1Q08174 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC7.2□□□□□ -1.26
PCDH1Q08174 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDH1Q08174 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDH1Q08174 AC090186.1-201ENST00000605991 572 ntBASIC7.2□□□□□ -1.26
PCDH1Q08174 AP004247.4-201ENST00000608484 942 ntBASIC7.2□□□□□ -1.26
PCDH1Q08174 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC7.2□□□□□ -1.26
PCDH1Q08174 AC008083.4-201ENST00000615076 444 ntBASIC7.2□□□□□ -1.26
PCDH1Q08174 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH1Q08174 AC022509.4-201ENST00000621404 572 ntBASIC7.2□□□□□ -1.26
PCDH1Q08174 METAP1-212ENST00000625963 147 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDH1Q08174 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDH1Q08174 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH1Q08174 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.2□□□□□ -1.26
PCDH1Q08174 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC7.2□□□□□ -1.26
PCDH1Q08174 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH1Q08174 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH1Q08174 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH1Q08174 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
PCDH1Q08174 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH1Q08174 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.2□□□□□ -1.26
PCDH1Q08174 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH1Q08174 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PCDH1Q08174 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
PCDH1Q08174 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDH1Q08174 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDH1Q08174 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PCDH1Q08174 TRIM60P14-201ENST00000513444 1419 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDH1Q08174 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDH1Q08174 AL117339.4-201ENST00000608335 7063 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
PCDH1Q08174 OR2AH1P-202ENST00000641232 2744 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 SAMMSON-222ENST00000641901 2727 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.19□□□□□ -1.26
PCDH1Q08174 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.19□□□□□ -1.26
PCDH1Q08174 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDH1Q08174 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.19□□□□□ -1.26
PCDH1Q08174 RNU4-21P-201ENST00000362802 126 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 RN7SKP63-201ENST00000363187 301 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 RNU1-16P-201ENST00000365477 164 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PCDH1Q08174 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PCDH1Q08174 RPL23AP59-201ENST00000399415 461 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 RPL24P7-201ENST00000399435 453 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 HNRNPCP2-201ENST00000399515 881 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDH1Q08174 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDH1Q08174 RN7SKP131-201ENST00000410698 301 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 RN7SKP85-201ENST00000411349 318 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 HMGB3P31-201ENST00000413333 595 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 CEACAMP8-201ENST00000413902 580 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC7.19□□□□□ -1.26
PCDH1Q08174 AC027644.1-201ENST00000419595 298 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDH1Q08174 AL022400.1-201ENST00000423946 935 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC7.19□□□□□ -1.26
PCDH1Q08174 MGAT2P2-201ENST00000427194 797 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PCDH1Q08174 MED14P1-201ENST00000430517 648 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDH1Q08174 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDH1Q08174 AC005297.1-201ENST00000444765 862 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDH1Q08174 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDH1Q08174 AL157827.1-201ENST00000447622 132 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC7.19□□□□□ -1.26
PCDH1Q08174 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDH1Q08174 AC107398.1-201ENST00000486904 505 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.19□□□□□ -1.26
PCDH1Q08174 AC127024.1-201ENST00000490847 418 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDH1Q08174 GTF2F2P1-201ENST00000511083 675 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 IGKV2-29-201ENST00000521304 372 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC7.19□□□□□ -1.26
PCDH1Q08174 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
PCDH1Q08174 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDH1Q08174 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC7.19□□□□□ -1.26
PCDH1Q08174 EIF4EBP2P2-201ENST00000563883 333 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDH1Q08174 ROCK1P1-201ENST00000573767 549 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 MTND1P15-201ENST00000579262 949 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDH1Q08174 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDH1Q08174 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC7.19□□□□□ -1.26
PCDH1Q08174 AC009955.2-201ENST00000597288 542 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 WBP1LP12-201ENST00000604449 331 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 AC018618.2-201ENST00000604770 446 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 CUX2P1-201ENST00000606426 298 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 AL021368.3-201ENST00000607119 578 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 AP002360.3-201ENST00000607673 710 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 AL451074.6-201ENST00000608512 729 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 AL391497.1-201ENST00000608671 547 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 AC004839.1-201ENST00000610269 501 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 AC143336.1-201ENST00000614164 836 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 AL121873.1-201ENST00000616013 524 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 AC016769.4-201ENST00000616893 535 ntBASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms