Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AL357562.1-201ENST00000624911 609 ntBASIC5.44□□□□□ -1.54
H3F3AP84243 AC073488.3-201ENST00000631611 778 ntBASIC5.44□□□□□ -1.54
H3F3AP84243 AC119674.1-202ENST00000641333 1860 ntBASIC5.44□□□□□ -1.54
H3F3AP84243 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
H3F3AP84243 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
H3F3AP84243 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
H3F3AP84243 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.44□□□□□ -1.54
H3F3AP84243 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.44□□□□□ -1.54
H3F3AP84243 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
H3F3AP84243 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
H3F3AP84243 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.44□□□□□ -1.54
H3F3AP84243 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
H3F3AP84243 AC104966.1-201ENST00000467010 1464 ntBASIC5.44□□□□□ -1.54
H3F3AP84243 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.44□□□□□ -1.54
H3F3AP84243 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.44□□□□□ -1.54
H3F3AP84243 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
H3F3AP84243 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
H3F3AP84243 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
H3F3AP84243 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
H3F3AP84243 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
H3F3AP84243 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
H3F3AP84243 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
H3F3AP84243 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
H3F3AP84243 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
H3F3AP84243 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
H3F3AP84243 RNU1-65P-201ENST00000363919 148 ntBASIC5.43□□□□□ -1.54
H3F3AP84243 RN7SKP187-201ENST00000365536 330 ntBASIC5.43□□□□□ -1.54
H3F3AP84243 SNORA51.9-201ENST00000384295 124 ntBASIC5.43□□□□□ -1.54
H3F3AP84243 RN7SKP166-201ENST00000410812 305 ntBASIC5.43□□□□□ -1.54
H3F3AP84243 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.43□□□□□ -1.54
H3F3AP84243 RPS7P8-201ENST00000418311 581 ntBASIC5.43□□□□□ -1.54
H3F3AP84243 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.43□□□□□ -1.54
H3F3AP84243 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.43□□□□□ -1.54
H3F3AP84243 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.43□□□□□ -1.54
H3F3AP84243 AL353662.1-201ENST00000439099 327 ntBASIC5.43□□□□□ -1.54
H3F3AP84243 RBMY2AP-201ENST00000445405 1157 ntBASIC5.43□□□□□ -1.54
H3F3AP84243 ZNF619P1-201ENST00000446539 752 ntBASIC5.43□□□□□ -1.54
H3F3AP84243 FTLP8-201ENST00000446770 267 ntBASIC5.43□□□□□ -1.54
H3F3AP84243 RBMY2CP-201ENST00000448575 1157 ntBASIC5.43□□□□□ -1.54
H3F3AP84243 RBMY2DP-202ENST00000448881 1157 ntBASIC5.43□□□□□ -1.54
H3F3AP84243 RBMY2BP-202ENST00000451071 1156 ntBASIC5.43□□□□□ -1.54
H3F3AP84243 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
H3F3AP84243 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.43□□□□□ -1.54
H3F3AP84243 RPL23AP40-201ENST00000487630 390 ntBASIC5.43□□□□□ -1.54
H3F3AP84243 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.43□□□□□ -1.54
H3F3AP84243 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.43□□□□□ -1.54
H3F3AP84243 Vault.2-201ENST00000516519 98 ntBASIC5.43□□□□□ -1.54
H3F3AP84243 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.43□□□□□ -1.54
H3F3AP84243 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.43□□□□□ -1.54
H3F3AP84243 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.43□□□□□ -1.54
H3F3AP84243 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.43□□□□□ -1.54
H3F3AP84243 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.43□□□□□ -1.54
H3F3AP84243 AC006512.2-201ENST00000543250 486 ntBASIC5.43□□□□□ -1.54
H3F3AP84243 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.43□□□□□ -1.54
H3F3AP84243 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.43□□□□□ -1.54
H3F3AP84243 AC107958.1-201ENST00000556576 290 ntBASIC5.43□□□□□ -1.54
H3F3AP84243 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC5.43□□□□□ -1.54
H3F3AP84243 AC007494.1-201ENST00000562293 760 ntBASIC5.43□□□□□ -1.54
H3F3AP84243 AC007346.1-201ENST00000569208 867 ntBASIC5.43□□□□□ -1.54
H3F3AP84243 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.43□□□□□ -1.54
H3F3AP84243 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.43□□□□□ -1.54
H3F3AP84243 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
H3F3AP84243 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.43□□□□□ -1.54
H3F3AP84243 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
H3F3AP84243 AC004890.3-201ENST00000605566 1095 ntBASIC5.43□□□□□ -1.54
H3F3AP84243 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.43□□□□□ -1.54
H3F3AP84243 MIR7109-201ENST00000613748 65 ntBASIC5.43□□□□□ -1.54
H3F3AP84243 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.43□□□□□ -1.54
H3F3AP84243 AP001052.1-201ENST00000626421 99 ntBASIC5.43□□□□□ -1.54
H3F3AP84243 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
H3F3AP84243 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.43□□□□□ -1.54
H3F3AP84243 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.43□□□□□ -1.54
H3F3AP84243 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.43□□□□□ -1.54
H3F3AP84243 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
H3F3AP84243 AL121768.1-201ENST00000613917 2544 ntBASIC5.43□□□□□ -1.54
H3F3AP84243 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.43□□□□□ -1.54
H3F3AP84243 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
H3F3AP84243 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.43□□□□□ -1.54
H3F3AP84243 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.43□□□□□ -1.54
H3F3AP84243 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.43□□□□□ -1.54
H3F3AP84243 AC083837.1-201ENST00000565297 2994 ntBASIC5.43□□□□□ -1.54
H3F3AP84243 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.42□□□□□ -1.54
H3F3AP84243 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
H3F3AP84243 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.42□□□□□ -1.54
H3F3AP84243 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
H3F3AP84243 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.42□□□□□ -1.54
H3F3AP84243 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.42□□□□□ -1.54
H3F3AP84243 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
H3F3AP84243 AC026523.2-201ENST00000625039 7739 ntBASIC5.42□□□□□ -1.54
H3F3AP84243 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
H3F3AP84243 AC063923.1-201ENST00000478982 1619 ntBASIC5.42□□□□□ -1.54
H3F3AP84243 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
H3F3AP84243 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
H3F3AP84243 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
H3F3AP84243 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
H3F3AP84243 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
H3F3AP84243 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
H3F3AP84243 RNA5SP375-201ENST00000362975 119 ntBASIC5.42□□□□□ -1.54
H3F3AP84243 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.42□□□□□ -1.54
H3F3AP84243 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms