Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.13□□□□□ -1.59
CX3CL1P78423 RPL3P13-201ENST00000550415 216 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.13□□□□□ -1.59
CX3CL1P78423 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.13□□□□□ -1.59
CX3CL1P78423 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.13□□□□□ -1.59
CX3CL1P78423 AC023968.1-201ENST00000560719 475 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.13□□□□□ -1.59
CX3CL1P78423 AC090079.2-201ENST00000575289 768 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 RN7SL66P-201ENST00000582099 264 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 MIMT1-201ENST00000597105 1050 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.13□□□□□ -1.59
CX3CL1P78423 AL512506.1-201ENST00000613918 449 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 U1.25-201ENST00000614085 162 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CL1P78423 U1.34-201ENST00000618578 162 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 U1.31-201ENST00000620022 160 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 AC211486.4-201ENST00000621495 113 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 AP003499.2-201ENST00000624100 483 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 AL162377.2-201ENST00000624532 337 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.13□□□□□ -1.59
CX3CL1P78423 AC005261.2-201ENST00000593427 4258 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.13□□□□□ -1.59
CX3CL1P78423 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.13□□□□□ -1.59
CX3CL1P78423 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CL1P78423 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CX3CL1P78423 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CL1P78423 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CX3CL1P78423 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CL1P78423 AC092111.2-201ENST00000611627 1414 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CL1P78423 AC137056.2-201ENST00000624055 1958 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
CX3CL1P78423 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CL1P78423 AC105749.1-201ENST00000631338 2008 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 AC068446.1-201ENST00000556425 1549 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 MTCO1P28-201ENST00000574177 1528 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CX3CL1P78423 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CX3CL1P78423 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CX3CL1P78423 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CX3CL1P78423 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CX3CL1P78423 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.12□□□□□ -1.59
CX3CL1P78423 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CX3CL1P78423 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CX3CL1P78423 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
CX3CL1P78423 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CX3CL1P78423 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CX3CL1P78423 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CX3CL1P78423 AC105235.1-201ENST00000623208 1816 ntBASIC5.12□□□□□ -1.59
CX3CL1P78423 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CX3CL1P78423 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CX3CL1P78423 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CX3CL1P78423 RNU1-84P-201ENST00000365447 164 ntBASIC5.12□□□□□ -1.59
CX3CL1P78423 RNU6-40P-201ENST00000384254 107 ntBASIC5.12□□□□□ -1.59
CX3CL1P78423 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.12□□□□□ -1.59
CX3CL1P78423 RN7SKP221-201ENST00000410420 301 ntBASIC5.12□□□□□ -1.59
CX3CL1P78423 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.12□□□□□ -1.59
CX3CL1P78423 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.12□□□□□ -1.59
CX3CL1P78423 AL139184.1-202ENST00000422303 222 ntBASIC5.12□□□□□ -1.59
CX3CL1P78423 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.12□□□□□ -1.59
CX3CL1P78423 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.12□□□□□ -1.59
CX3CL1P78423 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.12□□□□□ -1.59
CX3CL1P78423 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.12□□□□□ -1.59
CX3CL1P78423 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.12□□□□□ -1.59
CX3CL1P78423 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.12□□□□□ -1.59
CX3CL1P78423 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.12□□□□□ -1.59
CX3CL1P78423 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.12□□□□□ -1.59
CX3CL1P78423 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.12□□□□□ -1.59
CX3CL1P78423 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.12□□□□□ -1.59
CX3CL1P78423 MARK2P8-201ENST00000476069 952 ntBASIC5.12□□□□□ -1.59
CX3CL1P78423 MTND3P24-201ENST00000506306 329 ntBASIC5.12□□□□□ -1.59
CX3CL1P78423 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.12□□□□□ -1.59
CX3CL1P78423 AC093664.1-201ENST00000511779 289 ntBASIC5.12□□□□□ -1.59
CX3CL1P78423 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.12□□□□□ -1.59
CX3CL1P78423 SNORA26.10-201ENST00000516427 141 ntBASIC5.12□□□□□ -1.59
CX3CL1P78423 AC067904.2-201ENST00000517322 1283 ntBASIC5.12□□□□□ -1.59
CX3CL1P78423 IGHV1-14-201ENST00000523391 241 ntBASIC5.12□□□□□ -1.59
CX3CL1P78423 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.12□□□□□ -1.59
CX3CL1P78423 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.12□□□□□ -1.59
CX3CL1P78423 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.12□□□□□ -1.59
CX3CL1P78423 AL136520.1-202ENST00000555494 763 ntBASIC5.12□□□□□ -1.59
CX3CL1P78423 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.12□□□□□ -1.59
CX3CL1P78423 MTND4LP25-201ENST00000570218 163 ntBASIC5.12□□□□□ -1.59
CX3CL1P78423 MIR212-201ENST00000586026 110 ntBASIC5.12□□□□□ -1.59
CX3CL1P78423 AL133247.2-201ENST00000603236 482 ntBASIC5.12□□□□□ -1.59
CX3CL1P78423 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.12□□□□□ -1.59
CX3CL1P78423 AL589743.6-201ENST00000611025 117 ntBASIC5.12□□□□□ -1.59
CX3CL1P78423 MIR6885-201ENST00000612241 66 ntBASIC5.12□□□□□ -1.59
CX3CL1P78423 AC005899.6-201ENST00000620729 297 ntBASIC5.12□□□□□ -1.59
CX3CL1P78423 LINC02495-203ENST00000636704 242 ntBASIC5.12□□□□□ -1.59
CX3CL1P78423 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CX3CL1P78423 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CX3CL1P78423 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CX3CL1P78423 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CX3CL1P78423 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CX3CL1P78423 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CX3CL1P78423 AL356317.1-201ENST00000396110 1436 ntBASIC5.12□□□□□ -1.59
CX3CL1P78423 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
CX3CL1P78423 AC217777.1-201ENST00000570034 1471 ntBASIC5.12□□□□□ -1.59
CX3CL1P78423 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms