Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.67□□□□□ -1.34
TPM4P67936 uc_338.26-201ENST00000612659 160 ntBASIC6.67□□□□□ -1.34
TPM4P67936 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TPM4P67936 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC6.67□□□□□ -1.34
TPM4P67936 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
TPM4P67936 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
TPM4P67936 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.67□□□□□ -1.34
TPM4P67936 AL133243.2-201ENST00000610331 1621 ntBASIC6.67□□□□□ -1.34
TPM4P67936 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TPM4P67936 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
TPM4P67936 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TPM4P67936 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TPM4P67936 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TPM4P67936 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TPM4P67936 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
TPM4P67936 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.66□□□□□ -1.34
TPM4P67936 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TPM4P67936 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.66□□□□□ -1.34
TPM4P67936 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.66□□□□□ -1.34
TPM4P67936 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TPM4P67936 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TPM4P67936 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
TPM4P67936 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.66□□□□□ -1.34
TPM4P67936 RNA5SP156-201ENST00000410250 110 ntBASIC6.66□□□□□ -1.34
TPM4P67936 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.66□□□□□ -1.34
TPM4P67936 AL158827.1-201ENST00000416300 391 ntBASIC6.66□□□□□ -1.34
TPM4P67936 ELOBP4-201ENST00000423418 296 ntBASIC6.66□□□□□ -1.34
TPM4P67936 CRIP1P1-201ENST00000427567 185 ntBASIC6.66□□□□□ -1.34
TPM4P67936 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
TPM4P67936 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.66□□□□□ -1.34
TPM4P67936 CXCR2P1-202ENST00000443392 1074 ntBASIC6.66□□□□□ -1.34
TPM4P67936 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
TPM4P67936 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.66□□□□□ -1.34
TPM4P67936 FRG2FP-204ENST00000453982 852 ntBASIC6.66□□□□□ -1.34
TPM4P67936 AL603882.1-201ENST00000463059 681 ntBASIC6.66□□□□□ -1.34
TPM4P67936 PFN1P6-201ENST00000476786 399 ntBASIC6.66□□□□□ -1.34
TPM4P67936 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.66□□□□□ -1.34
TPM4P67936 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.66□□□□□ -1.34
TPM4P67936 AC090424.1-201ENST00000535243 736 ntBASIC6.66□□□□□ -1.34
TPM4P67936 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.66□□□□□ -1.34
TPM4P67936 DPPA3P2-202ENST00000557188 1219 ntBASIC6.66□□□□□ -1.34
TPM4P67936 AC037479.1-201ENST00000558361 625 ntBASIC6.66□□□□□ -1.34
TPM4P67936 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.66□□□□□ -1.34
TPM4P67936 AC019322.1-201ENST00000571869 389 ntBASIC6.66□□□□□ -1.34
TPM4P67936 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.66□□□□□ -1.34
TPM4P67936 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.66□□□□□ -1.34
TPM4P67936 AL513327.3-201ENST00000602618 469 ntBASIC6.66□□□□□ -1.34
TPM4P67936 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.66□□□□□ -1.34
TPM4P67936 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.66□□□□□ -1.34
TPM4P67936 AC027506.1-201ENST00000621395 198 ntBASIC6.66□□□□□ -1.34
TPM4P67936 AC068213.1-201ENST00000625124 226 ntBASIC6.66□□□□□ -1.34
TPM4P67936 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
TPM4P67936 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.66□□□□□ -1.34
TPM4P67936 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
TPM4P67936 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
TPM4P67936 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.66□□□□□ -1.34
TPM4P67936 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TPM4P67936 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TPM4P67936 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TPM4P67936 AC027279.4-201ENST00000624371 2072 ntBASIC6.65□□□□□ -1.34
TPM4P67936 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TPM4P67936 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
TPM4P67936 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC6.65□□□□□ -1.34
TPM4P67936 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TPM4P67936 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TPM4P67936 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TPM4P67936 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.65□□□□□ -1.34
TPM4P67936 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
TPM4P67936 SNORA5.1-201ENST00000384275 131 ntBASIC6.65□□□□□ -1.34
TPM4P67936 AL117344.1-201ENST00000407196 616 ntBASIC6.65□□□□□ -1.34
TPM4P67936 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TPM4P67936 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.65□□□□□ -1.34
TPM4P67936 OSTCP4-201ENST00000424397 449 ntBASIC6.65□□□□□ -1.34
TPM4P67936 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.65□□□□□ -1.34
TPM4P67936 OR2L9P-201ENST00000444456 913 ntBASIC6.65□□□□□ -1.34
TPM4P67936 AL512593.1-201ENST00000444758 779 ntBASIC6.65□□□□□ -1.34
TPM4P67936 COX4I1P2-201ENST00000447446 547 ntBASIC6.65□□□□□ -1.34
TPM4P67936 AL929410.2-201ENST00000451170 189 ntBASIC6.65□□□□□ -1.34
TPM4P67936 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.65□□□□□ -1.34
TPM4P67936 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.65□□□□□ -1.34
TPM4P67936 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.65□□□□□ -1.34
TPM4P67936 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.65□□□□□ -1.34
TPM4P67936 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.65□□□□□ -1.34
TPM4P67936 NATP-201ENST00000523491 878 ntBASIC6.65□□□□□ -1.34
TPM4P67936 OR4A42P-201ENST00000531397 938 ntBASIC6.65□□□□□ -1.34
TPM4P67936 AL121594.2-201ENST00000541658 472 ntBASIC6.65□□□□□ -1.34
TPM4P67936 RPL41P2-201ENST00000544920 409 ntBASIC6.65□□□□□ -1.34
TPM4P67936 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.65□□□□□ -1.34
TPM4P67936 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.65□□□□□ -1.34
TPM4P67936 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.65□□□□□ -1.34
TPM4P67936 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.65□□□□□ -1.34
TPM4P67936 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.65□□□□□ -1.34
TPM4P67936 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.65□□□□□ -1.34
TPM4P67936 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.65□□□□□ -1.34
TPM4P67936 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.65□□□□□ -1.34
TPM4P67936 AL022394.1-201ENST00000606979 292 ntBASIC6.65□□□□□ -1.34
TPM4P67936 AC005618.4-201ENST00000625053 554 ntBASIC6.65□□□□□ -1.34
TPM4P67936 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
TPM4P67936 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
TPM4P67936 FANCD2P2-201ENST00000437591 1400 ntBASIC6.65□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms