Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC100767.2-201ENST00000604840 693 ntBASIC7.4□□□□□ -1.22
RHBDL3P58872 AL513218.1-201ENST00000606527 391 ntBASIC7.4□□□□□ -1.22
RHBDL3P58872 AL352984.2-201ENST00000611153 546 ntBASIC7.4□□□□□ -1.22
RHBDL3P58872 AC130448.2-201ENST00000624082 374 ntBASIC7.4□□□□□ -1.22
RHBDL3P58872 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RHBDL3P58872 SAMM50P1-201ENST00000455403 1399 ntBASIC7.4□□□□□ -1.22
RHBDL3P58872 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RHBDL3P58872 AC024651.2-201ENST00000562480 2098 ntBASIC7.4□□□□□ -1.23
RHBDL3P58872 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
RHBDL3P58872 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
RHBDL3P58872 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
RHBDL3P58872 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RHBDL3P58872 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RHBDL3P58872 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RHBDL3P58872 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.39□□□□□ -1.23
RHBDL3P58872 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RHBDL3P58872 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RHBDL3P58872 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RHBDL3P58872 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RHBDL3P58872 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RHBDL3P58872 AL442128.2-201ENST00000620246 1824 ntBASIC7.39□□□□□ -1.23
RHBDL3P58872 FGG-205ENST00000407946 1636 ntTSL 5 BASIC7.39□□□□□ -1.23
RHBDL3P58872 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.39□□□□□ -1.23
RHBDL3P58872 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
RHBDL3P58872 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RHBDL3P58872 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.39□□□□□ -1.23
RHBDL3P58872 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RHBDL3P58872 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
RHBDL3P58872 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
RHBDL3P58872 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC7.39□□□□□ -1.23
RHBDL3P58872 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RHBDL3P58872 SEPT14P12-201ENST00000442280 560 ntBASIC7.39□□□□□ -1.23
RHBDL3P58872 AL161722.1-201ENST00000446972 1032 ntBASIC7.39□□□□□ -1.23
RHBDL3P58872 VPS25P1-201ENST00000455691 508 ntBASIC7.39□□□□□ -1.23
RHBDL3P58872 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC7.39□□□□□ -1.23
RHBDL3P58872 Y_RNA.667-201ENST00000516212 107 ntBASIC7.39□□□□□ -1.23
RHBDL3P58872 RNA5SP438-201ENST00000516561 112 ntBASIC7.39□□□□□ -1.23
RHBDL3P58872 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.39□□□□□ -1.23
RHBDL3P58872 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC7.39□□□□□ -1.23
RHBDL3P58872 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
RHBDL3P58872 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC7.39□□□□□ -1.23
RHBDL3P58872 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.39□□□□□ -1.23
RHBDL3P58872 RPA2P1-201ENST00000556557 721 ntBASIC7.39□□□□□ -1.23
RHBDL3P58872 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.39□□□□□ -1.23
RHBDL3P58872 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.39□□□□□ -1.23
RHBDL3P58872 AC008555.7-201ENST00000605008 583 ntBASIC7.39□□□□□ -1.23
RHBDL3P58872 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RHBDL3P58872 MIR6809-201ENST00000612189 116 ntBASIC7.39□□□□□ -1.23
RHBDL3P58872 AL136228.1-201ENST00000622221 319 ntBASIC7.39□□□□□ -1.23
RHBDL3P58872 AC073862.4-201ENST00000622982 854 ntBASIC7.39□□□□□ -1.23
RHBDL3P58872 AL118508.4-201ENST00000624142 1176 ntBASIC7.39□□□□□ -1.23
RHBDL3P58872 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC7.39□□□□□ -1.23
RHBDL3P58872 OR7A1P-202ENST00000641542 1158 ntBASIC7.39□□□□□ -1.23
RHBDL3P58872 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
RHBDL3P58872 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
RHBDL3P58872 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RHBDL3P58872 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.39□□□□□ -1.23
RHBDL3P58872 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
RHBDL3P58872 AP000547.3-204ENST00000588548 2523 ntBASIC7.39□□□□□ -1.23
RHBDL3P58872 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RHBDL3P58872 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
RHBDL3P58872 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
RHBDL3P58872 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
RHBDL3P58872 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC7.38□□□□□ -1.23
RHBDL3P58872 AP002370.1-201ENST00000528055 1602 ntBASIC7.38□□□□□ -1.23
RHBDL3P58872 TNPO1P2-201ENST00000426249 2665 ntBASIC7.38□□□□□ -1.23
RHBDL3P58872 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
RHBDL3P58872 BIN2P1-201ENST00000504996 1530 ntBASIC7.38□□□□□ -1.23
RHBDL3P58872 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RHBDL3P58872 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
RHBDL3P58872 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7.38□□□□□ -1.23
RHBDL3P58872 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
RHBDL3P58872 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RHBDL3P58872 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RHBDL3P58872 OR5T3-201ENST00000303059 1023 ntBASIC7.38□□□□□ -1.23
RHBDL3P58872 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RHBDL3P58872 RNA5SP350-201ENST00000363298 111 ntBASIC7.38□□□□□ -1.23
RHBDL3P58872 RNA5SP478-201ENST00000364657 115 ntBASIC7.38□□□□□ -1.23
RHBDL3P58872 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
RHBDL3P58872 MT-RNR1-201ENST00000389680 954 ntBASIC7.38□□□□□ -1.23
RHBDL3P58872 AL132875.1-201ENST00000403623 949 ntBASIC7.38□□□□□ -1.23
RHBDL3P58872 AL096800.1-201ENST00000405326 893 ntBASIC7.38□□□□□ -1.23
RHBDL3P58872 RPL35AP31-201ENST00000418340 337 ntBASIC7.38□□□□□ -1.23
RHBDL3P58872 CYP4F30P-202ENST00000420048 405 ntBASIC7.38□□□□□ -1.23
RHBDL3P58872 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC7.38□□□□□ -1.23
RHBDL3P58872 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.38□□□□□ -1.23
RHBDL3P58872 TRIM60P13-201ENST00000432350 1283 ntBASIC7.38□□□□□ -1.23
RHBDL3P58872 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC7.38□□□□□ -1.23
RHBDL3P58872 AC016908.1-201ENST00000442571 1219 ntBASIC7.38□□□□□ -1.23
RHBDL3P58872 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.38□□□□□ -1.23
RHBDL3P58872 FTLP8-201ENST00000446770 267 ntBASIC7.38□□□□□ -1.23
RHBDL3P58872 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.38□□□□□ -1.23
RHBDL3P58872 AC239798.3-201ENST00000454459 408 ntBASIC7.38□□□□□ -1.23
RHBDL3P58872 AC025181.1-201ENST00000477507 416 ntBASIC7.38□□□□□ -1.23
RHBDL3P58872 STRADBP1-201ENST00000478954 1281 ntBASIC7.38□□□□□ -1.23
RHBDL3P58872 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RHBDL3P58872 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.38□□□□□ -1.23
RHBDL3P58872 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.38□□□□□ -1.23
RHBDL3P58872 AC092865.1-201ENST00000544395 1023 ntBASIC7.38□□□□□ -1.23
RHBDL3P58872 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms