Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.29□□□□□ -1.24
NUP98P52948 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
NUP98P52948 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC7.29□□□□□ -1.24
NUP98P52948 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
NUP98P52948 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
NUP98P52948 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
NUP98P52948 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
NUP98P52948 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
NUP98P52948 RNA5SP30-201ENST00000365552 115 ntBASIC7.29□□□□□ -1.24
NUP98P52948 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
NUP98P52948 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
NUP98P52948 AC087672.1-201ENST00000479876 766 ntBASIC7.29□□□□□ -1.24
NUP98P52948 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC7.29□□□□□ -1.24
NUP98P52948 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC7.29□□□□□ -1.24
NUP98P52948 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
NUP98P52948 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC7.29□□□□□ -1.24
NUP98P52948 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC7.29□□□□□ -1.24
NUP98P52948 AC137695.1-201ENST00000604126 489 ntBASIC7.29□□□□□ -1.24
NUP98P52948 AC016769.4-201ENST00000616893 535 ntBASIC7.29□□□□□ -1.24
NUP98P52948 MIR8080-201ENST00000622224 89 ntBASIC7.29□□□□□ -1.24
NUP98P52948 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
NUP98P52948 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
NUP98P52948 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
NUP98P52948 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
NUP98P52948 AC089998.1-201ENST00000548575 3141 ntBASIC7.28□□□□□ -1.24
NUP98P52948 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.28□□□□□ -1.24
NUP98P52948 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
NUP98P52948 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
NUP98P52948 AC022034.1-201ENST00000512867 2156 ntBASIC7.28□□□□□ -1.24
NUP98P52948 AC006511.3-201ENST00000624929 1783 ntBASIC7.28□□□□□ -1.24
NUP98P52948 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
NUP98P52948 AC007568.1-201ENST00000422912 471 ntBASIC7.28□□□□□ -1.24
NUP98P52948 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC7.28□□□□□ -1.24
NUP98P52948 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC7.28□□□□□ -1.24
NUP98P52948 AL450023.1-201ENST00000450868 751 ntBASIC7.28□□□□□ -1.24
NUP98P52948 RANP1-206ENST00000455094 651 ntBASIC7.28□□□□□ -1.24
NUP98P52948 RPL7L1P3-201ENST00000455249 689 ntBASIC7.28□□□□□ -1.24
NUP98P52948 AC006539.1-201ENST00000481419 501 ntBASIC7.28□□□□□ -1.24
NUP98P52948 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
NUP98P52948 AC093270.2-201ENST00000486157 792 ntBASIC7.28□□□□□ -1.24
NUP98P52948 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC7.28□□□□□ -1.24
NUP98P52948 BX510359.5-201ENST00000515651 304 ntBASIC7.28□□□□□ -1.24
NUP98P52948 SCARNA6.1-201ENST00000516989 238 ntBASIC7.28□□□□□ -1.24
NUP98P52948 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC7.28□□□□□ -1.24
NUP98P52948 HAUS8P1-201ENST00000549005 542 ntBASIC7.28□□□□□ -1.24
NUP98P52948 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC7.28□□□□□ -1.24
NUP98P52948 AC090651.1-201ENST00000567865 634 ntBASIC7.28□□□□□ -1.24
NUP98P52948 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC7.28□□□□□ -1.24
NUP98P52948 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.28□□□□□ -1.24
NUP98P52948 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
NUP98P52948 AC024589.2-201ENST00000605642 1294 ntBASIC7.28□□□□□ -1.24
NUP98P52948 AL359513.1-201ENST00000614364 557 ntBASIC7.28□□□□□ -1.24
NUP98P52948 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.28□□□□□ -1.24
NUP98P52948 MFSD8-219ENST00000641228 2559 ntBASIC7.28□□□□□ -1.24
NUP98P52948 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
NUP98P52948 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.28□□□□□ -1.24
NUP98P52948 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
NUP98P52948 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
NUP98P52948 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
NUP98P52948 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
NUP98P52948 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.27□□□□□ -1.25
NUP98P52948 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
NUP98P52948 AMELX-201ENST00000348912 737 ntTSL 5 BASIC7.27□□□□□ -1.25
NUP98P52948 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC7.27□□□□□ -1.25
NUP98P52948 RPS26P41-201ENST00000450370 284 ntBASIC7.27□□□□□ -1.25
NUP98P52948 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.27□□□□□ -1.25
NUP98P52948 AC024558.1-201ENST00000505008 528 ntBASIC7.27□□□□□ -1.25
NUP98P52948 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC7.27□□□□□ -1.25
NUP98P52948 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.27□□□□□ -1.25
NUP98P52948 CYCSP1-201ENST00000604815 315 ntBASIC7.27□□□□□ -1.25
NUP98P52948 WDR75-207ENST00000631047 270 ntTSL 5 BASIC7.27□□□□□ -1.25
NUP98P52948 THAP12P9-201ENST00000503971 2360 ntBASIC7.27□□□□□ -1.25
NUP98P52948 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
NUP98P52948 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
NUP98P52948 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
NUP98P52948 IMMTP1-201ENST00000435590 2219 ntBASIC7.27□□□□□ -1.25
NUP98P52948 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
NUP98P52948 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
NUP98P52948 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.27□□□□□ -1.25
NUP98P52948 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
NUP98P52948 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
NUP98P52948 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
NUP98P52948 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC7.27□□□□□ -1.25
NUP98P52948 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
NUP98P52948 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
NUP98P52948 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
NUP98P52948 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC7.27□□□□□ -1.25
NUP98P52948 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC7.27□□□□□ -1.25
NUP98P52948 FABP5P2-201ENST00000439042 408 ntBASIC7.27□□□□□ -1.25
NUP98P52948 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC7.27□□□□□ -1.25
NUP98P52948 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.27□□□□□ -1.25
NUP98P52948 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC7.27□□□□□ -1.25
NUP98P52948 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC7.27□□□□□ -1.25
NUP98P52948 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NUP98P52948 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.26□□□□□ -1.25
NUP98P52948 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
NUP98P52948 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC7.26□□□□□ -1.25
NUP98P52948 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
NUP98P52948 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
NUP98P52948 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms