Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SRP9P49458 SAMM50P1-201ENST00000455403 1399 ntBASIC5.4□□□□□ -1.55
SRP9P49458 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
SRP9P49458 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SRP9P49458 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SRP9P49458 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SRP9P49458 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SRP9P49458 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SRP9P49458 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.39□□□□□ -1.55
SRP9P49458 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.39□□□□□ -1.55
SRP9P49458 AL136984.1-201ENST00000607611 1893 ntBASIC5.39□□□□□ -1.55
SRP9P49458 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SRP9P49458 AL132656.3-201ENST00000606384 1595 ntBASIC5.39□□□□□ -1.55
SRP9P49458 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SRP9P49458 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
SRP9P49458 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.39□□□□□ -1.55
SRP9P49458 AC016745.2-201ENST00000608834 3443 ntBASIC5.39□□□□□ -1.55
SRP9P49458 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.39□□□□□ -1.55
SRP9P49458 RPL11P4-201ENST00000332269 436 ntBASIC5.39□□□□□ -1.55
SRP9P49458 RN7SKP250-201ENST00000363924 321 ntBASIC5.39□□□□□ -1.55
SRP9P49458 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SRP9P49458 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.39□□□□□ -1.55
SRP9P49458 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.39□□□□□ -1.55
SRP9P49458 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.39□□□□□ -1.55
SRP9P49458 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.39□□□□□ -1.55
SRP9P49458 CLNS1AP1-201ENST00000435954 682 ntBASIC5.39□□□□□ -1.55
SRP9P49458 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.39□□□□□ -1.55
SRP9P49458 Z83838.1-202ENST00000456225 839 ntBASIC5.39□□□□□ -1.55
SRP9P49458 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.39□□□□□ -1.55
SRP9P49458 RN7SL369P-201ENST00000477138 299 ntBASIC5.39□□□□□ -1.55
SRP9P49458 AC093719.1-201ENST00000480427 441 ntBASIC5.39□□□□□ -1.55
SRP9P49458 AC005017.1-201ENST00000482002 490 ntBASIC5.39□□□□□ -1.55
SRP9P49458 OR9A1P-202ENST00000484361 945 ntBASIC5.39□□□□□ -1.55
SRP9P49458 RPL9P15-201ENST00000491096 532 ntBASIC5.39□□□□□ -1.55
SRP9P49458 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SRP9P49458 KHDC1P1-201ENST00000511053 508 ntBASIC5.39□□□□□ -1.55
SRP9P49458 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.39□□□□□ -1.55
SRP9P49458 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.39□□□□□ -1.55
SRP9P49458 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.39□□□□□ -1.55
SRP9P49458 RNA5SP400-201ENST00000517155 111 ntBASIC5.39□□□□□ -1.55
SRP9P49458 AC020937.1-201ENST00000519677 1013 ntBASIC5.39□□□□□ -1.55
SRP9P49458 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.39□□□□□ -1.55
SRP9P49458 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.39□□□□□ -1.55
SRP9P49458 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.39□□□□□ -1.55
SRP9P49458 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.39□□□□□ -1.55
SRP9P49458 AC138207.8-204ENST00000579588 527 ntBASIC5.39□□□□□ -1.55
SRP9P49458 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.39□□□□□ -1.55
SRP9P49458 MIR132-201ENST00000591554 101 ntBASIC5.39□□□□□ -1.55
SRP9P49458 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SRP9P49458 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SRP9P49458 AC011500.1-201ENST00000601963 469 ntBASIC5.39□□□□□ -1.55
SRP9P49458 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.39□□□□□ -1.55
SRP9P49458 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.39□□□□□ -1.55
SRP9P49458 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.39□□□□□ -1.55
SRP9P49458 MIR6823-201ENST00000622118 61 ntBASIC5.39□□□□□ -1.55
SRP9P49458 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.39□□□□□ -1.55
SRP9P49458 OR7E91P-202ENST00000642062 1198 ntBASIC5.39□□□□□ -1.55
SRP9P49458 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.39□□□□□ -1.55
SRP9P49458 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.39□□□□□ -1.55
SRP9P49458 LINC02019-201ENST00000608605 2060 ntBASIC5.39□□□□□ -1.55
SRP9P49458 AC027279.4-201ENST00000624371 2072 ntBASIC5.39□□□□□ -1.55
SRP9P49458 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SRP9P49458 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.39□□□□□ -1.55
SRP9P49458 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.39□□□□□ -1.55
SRP9P49458 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SRP9P49458 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SRP9P49458 HDAC1P2-201ENST00000453661 1398 ntBASIC5.39□□□□□ -1.55
SRP9P49458 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SRP9P49458 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SRP9P49458 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SRP9P49458 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SRP9P49458 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.39□□□□□ -1.55
SRP9P49458 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SRP9P49458 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SRP9P49458 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SRP9P49458 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
SRP9P49458 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SRP9P49458 CASC19-246ENST00000641625 1606 ntBASIC5.38□□□□□ -1.55
SRP9P49458 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.38□□□□□ -1.55
SRP9P49458 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SRP9P49458 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SRP9P49458 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SRP9P49458 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.38□□□□□ -1.55
SRP9P49458 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.38□□□□□ -1.55
SRP9P49458 RNA5SP77-201ENST00000365394 120 ntBASIC5.38□□□□□ -1.55
SRP9P49458 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.38□□□□□ -1.55
SRP9P49458 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.38□□□□□ -1.55
SRP9P49458 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.38□□□□□ -1.55
SRP9P49458 AL359885.1-201ENST00000415786 903 ntBASIC5.38□□□□□ -1.55
SRP9P49458 RPL7AP51-201ENST00000422016 760 ntBASIC5.38□□□□□ -1.55
SRP9P49458 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.38□□□□□ -1.55
SRP9P49458 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.38□□□□□ -1.55
SRP9P49458 RPL5P2-201ENST00000429598 854 ntBASIC5.38□□□□□ -1.55
SRP9P49458 IGLV3-4-201ENST00000432300 244 ntBASIC5.38□□□□□ -1.55
SRP9P49458 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.38□□□□□ -1.55
SRP9P49458 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.38□□□□□ -1.55
SRP9P49458 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.38□□□□□ -1.55
SRP9P49458 H3F3AP5-201ENST00000475267 429 ntBASIC5.38□□□□□ -1.55
SRP9P49458 AC098818.1-201ENST00000478593 252 ntBASIC5.38□□□□□ -1.55
SRP9P49458 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms