Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC5.12□□□□□ -1.59
NKX2-1P43699 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.12□□□□□ -1.59
NKX2-1P43699 AL031429.2-201ENST00000602605 649 ntBASIC5.12□□□□□ -1.59
NKX2-1P43699 AC007423.1-201ENST00000605009 627 ntBASIC5.12□□□□□ -1.59
NKX2-1P43699 HMGB1P51-201ENST00000605166 638 ntBASIC5.12□□□□□ -1.59
NKX2-1P43699 AC073111.2-201ENST00000605657 1075 ntBASIC5.12□□□□□ -1.59
NKX2-1P43699 AC092574.1-201ENST00000609771 420 ntBASIC5.12□□□□□ -1.59
NKX2-1P43699 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC5.12□□□□□ -1.59
NKX2-1P43699 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.12□□□□□ -1.59
NKX2-1P43699 MIR7854-201ENST00000620068 65 ntBASIC5.12□□□□□ -1.59
NKX2-1P43699 AC080188.3-201ENST00000624842 748 ntBASIC5.12□□□□□ -1.59
NKX2-1P43699 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.12□□□□□ -1.59
NKX2-1P43699 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.12□□□□□ -1.59
NKX2-1P43699 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.12□□□□□ -1.59
NKX2-1P43699 AP001541.1-201ENST00000623322 1904 ntBASIC5.12□□□□□ -1.59
NKX2-1P43699 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-1P43699 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
NKX2-1P43699 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-1P43699 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-1P43699 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
NKX2-1P43699 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.12□□□□□ -1.59
NKX2-1P43699 AC018628.1-201ENST00000624147 3819 ntBASIC5.12□□□□□ -1.59
NKX2-1P43699 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
NKX2-1P43699 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.12□□□□□ -1.59
NKX2-1P43699 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-1P43699 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-1P43699 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-1P43699 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX2-1P43699 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-1P43699 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-1P43699 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-1P43699 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-1P43699 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
NKX2-1P43699 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-1P43699 SNORA11D-201ENST00000408548 128 ntBASIC5.11□□□□□ -1.59
NKX2-1P43699 SNORA11E-201ENST00000408778 128 ntBASIC5.11□□□□□ -1.59
NKX2-1P43699 RPLP1P10-201ENST00000413972 339 ntBASIC5.11□□□□□ -1.59
NKX2-1P43699 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX2-1P43699 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX2-1P43699 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX2-1P43699 RPL5P10-201ENST00000445207 894 ntBASIC5.11□□□□□ -1.59
NKX2-1P43699 MTND5P8-201ENST00000449817 1083 ntBASIC5.11□□□□□ -1.59
NKX2-1P43699 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX2-1P43699 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX2-1P43699 OR9A1P-202ENST00000484361 945 ntBASIC5.11□□□□□ -1.59
NKX2-1P43699 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX2-1P43699 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.11□□□□□ -1.59
NKX2-1P43699 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX2-1P43699 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX2-1P43699 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX2-1P43699 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX2-1P43699 IGHVII-49-1-201ENST00000521760 224 ntBASIC5.11□□□□□ -1.59
NKX2-1P43699 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX2-1P43699 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX2-1P43699 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX2-1P43699 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX2-1P43699 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.11□□□□□ -1.59
NKX2-1P43699 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.11□□□□□ -1.59
NKX2-1P43699 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX2-1P43699 AC090079.2-201ENST00000575289 768 ntBASIC5.11□□□□□ -1.59
NKX2-1P43699 WDR45BP1-201ENST00000583470 1029 ntBASIC5.11□□□□□ -1.59
NKX2-1P43699 NPIPB1P-202ENST00000588786 828 ntBASIC5.11□□□□□ -1.59
NKX2-1P43699 RPL21P136-201ENST00000605378 396 ntBASIC5.11□□□□□ -1.59
NKX2-1P43699 AC019257.2-201ENST00000605539 497 ntBASIC5.11□□□□□ -1.59
NKX2-1P43699 AC012213.4-201ENST00000606457 354 ntBASIC5.11□□□□□ -1.59
NKX2-1P43699 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.11□□□□□ -1.59
NKX2-1P43699 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX2-1P43699 MIR6085-201ENST00000618314 110 ntBASIC5.11□□□□□ -1.59
NKX2-1P43699 AC005753.1-201ENST00000623837 618 ntBASIC5.11□□□□□ -1.59
NKX2-1P43699 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-1P43699 HDAC1P2-201ENST00000453661 1398 ntBASIC5.11□□□□□ -1.59
NKX2-1P43699 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-1P43699 AL356317.1-201ENST00000396110 1436 ntBASIC5.11□□□□□ -1.59
NKX2-1P43699 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
NKX2-1P43699 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-1P43699 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX2-1P43699 WDR95P-201ENST00000425638 1542 ntBASIC5.11□□□□□ -1.59
NKX2-1P43699 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
NKX2-1P43699 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-1P43699 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-1P43699 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-1P43699 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-1P43699 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
NKX2-1P43699 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NKX2-1P43699 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
NKX2-1P43699 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
NKX2-1P43699 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX2-1P43699 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
NKX2-1P43699 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
NKX2-1P43699 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NKX2-1P43699 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.1□□□□□ -1.59
NKX2-1P43699 AC140134.1-201ENST00000511830 3544 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX2-1P43699 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-1P43699 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-1P43699 OR56A4-201ENST00000330728 1209 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX2-1P43699 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX2-1P43699 AC074375.1-201ENST00000372993 192 ntBASIC5.1□□□□□ -1.59
NKX2-1P43699 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms