Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PTPN9P43378 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.42□□□□□ -1.38
PTPN9P43378 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PTPN9P43378 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PTPN9P43378 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.42□□□□□ -1.38
PTPN9P43378 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PTPN9P43378 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
PTPN9P43378 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
PTPN9P43378 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.42□□□□□ -1.38
PTPN9P43378 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.42□□□□□ -1.38
PTPN9P43378 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PTPN9P43378 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.41□□□□□ -1.38
PTPN9P43378 AC024587.1-201ENST00000505925 2157 ntBASIC6.41□□□□□ -1.38
PTPN9P43378 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PTPN9P43378 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.41□□□□□ -1.38
PTPN9P43378 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.41□□□□□ -1.38
PTPN9P43378 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.41□□□□□ -1.38
PTPN9P43378 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PTPN9P43378 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.41□□□□□ -1.38
PTPN9P43378 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PTPN9P43378 DHFRP5-201ENST00000406944 564 ntBASIC6.41□□□□□ -1.38
PTPN9P43378 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.41□□□□□ -1.38
PTPN9P43378 AL359885.1-201ENST00000415786 903 ntBASIC6.41□□□□□ -1.38
PTPN9P43378 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.41□□□□□ -1.38
PTPN9P43378 NME1P1-201ENST00000420914 382 ntBASIC6.41□□□□□ -1.38
PTPN9P43378 MTND2P11-201ENST00000423638 648 ntBASIC6.41□□□□□ -1.38
PTPN9P43378 RPL7AP14-201ENST00000424041 802 ntBASIC6.41□□□□□ -1.38
PTPN9P43378 RPSAP65-201ENST00000429660 595 ntBASIC6.41□□□□□ -1.38
PTPN9P43378 SUMO2P8-201ENST00000434672 286 ntBASIC6.41□□□□□ -1.38
PTPN9P43378 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.41□□□□□ -1.38
PTPN9P43378 GAPDHP59-201ENST00000435908 267 ntBASIC6.41□□□□□ -1.38
PTPN9P43378 AC096632.2-201ENST00000438139 1239 ntBASIC6.41□□□□□ -1.38
PTPN9P43378 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.41□□□□□ -1.38
PTPN9P43378 OR52Y1P-201ENST00000452418 828 ntBASIC6.41□□□□□ -1.38
PTPN9P43378 AC092349.1-201ENST00000504903 310 ntBASIC6.41□□□□□ -1.38
PTPN9P43378 AC008945.1-201ENST00000505144 499 ntBASIC6.41□□□□□ -1.38
PTPN9P43378 AC113367.2-201ENST00000505749 160 ntBASIC6.41□□□□□ -1.38
PTPN9P43378 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.41□□□□□ -1.38
PTPN9P43378 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.41□□□□□ -1.38
PTPN9P43378 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.41□□□□□ -1.38
PTPN9P43378 AC004232.2-201ENST00000574245 821 ntBASIC6.41□□□□□ -1.38
PTPN9P43378 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.41□□□□□ -1.38
PTPN9P43378 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.41□□□□□ -1.38
PTPN9P43378 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC6.41□□□□□ -1.38
PTPN9P43378 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.41□□□□□ -1.38
PTPN9P43378 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.41□□□□□ -1.38
PTPN9P43378 RN7SL261P-201ENST00000613441 282 ntBASIC6.41□□□□□ -1.38
PTPN9P43378 uc_338.31-201ENST00000615595 186 ntBASIC6.41□□□□□ -1.38
PTPN9P43378 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.41□□□□□ -1.38
PTPN9P43378 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.41□□□□□ -1.38
PTPN9P43378 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PTPN9P43378 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
PTPN9P43378 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
PTPN9P43378 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.41□□□□□ -1.38
PTPN9P43378 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
PTPN9P43378 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
PTPN9P43378 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.41□□□□□ -1.38
PTPN9P43378 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.41□□□□□ -1.38
PTPN9P43378 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.41□□□□□ -1.38
PTPN9P43378 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PTPN9P43378 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.4□□□□□ -1.38
PTPN9P43378 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
PTPN9P43378 AC068769.1-201ENST00000474767 2426 ntBASIC6.4□□□□□ -1.38
PTPN9P43378 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
PTPN9P43378 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
PTPN9P43378 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PTPN9P43378 AP004289.1-201ENST00000436307 2205 ntBASIC6.4□□□□□ -1.38
PTPN9P43378 RNA5SP156-201ENST00000410250 110 ntBASIC6.4□□□□□ -1.38
PTPN9P43378 RN7SKP86-201ENST00000410454 332 ntBASIC6.4□□□□□ -1.38
PTPN9P43378 PTCD2P2-201ENST00000415579 1095 ntBASIC6.4□□□□□ -1.38
PTPN9P43378 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.4□□□□□ -1.38
PTPN9P43378 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.4□□□□□ -1.38
PTPN9P43378 MTATP6P11-201ENST00000428071 670 ntBASIC6.4□□□□□ -1.38
PTPN9P43378 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC6.4□□□□□ -1.38
PTPN9P43378 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PTPN9P43378 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.4□□□□□ -1.38
PTPN9P43378 AL513343.1-201ENST00000451818 792 ntBASIC6.4□□□□□ -1.38
PTPN9P43378 RAB28P2-201ENST00000454299 641 ntBASIC6.4□□□□□ -1.38
PTPN9P43378 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.4□□□□□ -1.38
PTPN9P43378 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.4□□□□□ -1.38
PTPN9P43378 AP002453.1-201ENST00000492327 668 ntBASIC6.4□□□□□ -1.38
PTPN9P43378 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.4□□□□□ -1.38
PTPN9P43378 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.4□□□□□ -1.38
PTPN9P43378 RNA5SP441-201ENST00000516809 88 ntBASIC6.4□□□□□ -1.38
PTPN9P43378 SNORA81.2-201ENST00000516868 170 ntBASIC6.4□□□□□ -1.38
PTPN9P43378 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.4□□□□□ -1.38
PTPN9P43378 AC021269.1-201ENST00000526860 705 ntBASIC6.4□□□□□ -1.38
PTPN9P43378 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.4□□□□□ -1.38
PTPN9P43378 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
PTPN9P43378 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.4□□□□□ -1.38
PTPN9P43378 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PTPN9P43378 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.4□□□□□ -1.38
PTPN9P43378 AC090286.3-201ENST00000573133 187 ntBASIC6.4□□□□□ -1.38
PTPN9P43378 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.4□□□□□ -1.38
PTPN9P43378 AC004890.3-201ENST00000605566 1095 ntBASIC6.4□□□□□ -1.38
PTPN9P43378 AC018659.2-201ENST00000624690 715 ntBASIC6.4□□□□□ -1.38
PTPN9P43378 AP000720.1-201ENST00000625091 483 ntBASIC6.4□□□□□ -1.38
PTPN9P43378 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.4□□□□□ -1.38
PTPN9P43378 AC111152.1-202ENST00000635848 339 ntBASIC6.4□□□□□ -1.38
PTPN9P43378 AL357140.4-201ENST00000636827 412 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 7.2 ms