Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
ATF4P18848 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
ATF4P18848 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC6.49□□□□□ -1.37
ATF4P18848 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
ATF4P18848 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
ATF4P18848 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
ATF4P18848 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ATF4P18848 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ATF4P18848 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC6.49□□□□□ -1.37
ATF4P18848 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
ATF4P18848 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.48□□□□□ -1.37
ATF4P18848 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ATF4P18848 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC6.48□□□□□ -1.37
ATF4P18848 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ATF4P18848 CDR1-202ENST00000625883 1485 ntBASIC6.48□□□□□ -1.37
ATF4P18848 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ATF4P18848 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ATF4P18848 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
ATF4P18848 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
ATF4P18848 AC008543.2-201ENST00000436907 1383 ntBASIC6.48□□□□□ -1.37
ATF4P18848 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ATF4P18848 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ATF4P18848 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ATF4P18848 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC6.48□□□□□ -1.37
ATF4P18848 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ATF4P18848 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.48□□□□□ -1.37
ATF4P18848 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
ATF4P18848 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
ATF4P18848 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
ATF4P18848 FAM32BP-201ENST00000344033 333 ntBASIC6.48□□□□□ -1.37
ATF4P18848 RN7SKP239-201ENST00000364814 295 ntBASIC6.48□□□□□ -1.37
ATF4P18848 SUGT1P1-201ENST00000379514 476 ntBASIC6.48□□□□□ -1.37
ATF4P18848 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
ATF4P18848 IGLV6-57-201ENST00000390285 353 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
ATF4P18848 SERPINB8-204ENST00000397988 1178 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ATF4P18848 AC074254.1-201ENST00000399152 404 ntTSL 5 BASIC6.48□□□□□ -1.37
ATF4P18848 RNU4-64P-201ENST00000410795 131 ntBASIC6.48□□□□□ -1.37
ATF4P18848 RMDN2-AS1-201ENST00000414365 859 ntTSL 4 BASIC6.48□□□□□ -1.37
ATF4P18848 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.48□□□□□ -1.37
ATF4P18848 LINC00426-202ENST00000417079 1045 ntTSL 3 BASIC6.48□□□□□ -1.37
ATF4P18848 LYPLA2P3-201ENST00000417429 576 ntBASIC6.48□□□□□ -1.37
ATF4P18848 AC006455.4-201ENST00000418297 528 ntTSL 4 BASIC6.48□□□□□ -1.37
ATF4P18848 AL360013.1-201ENST00000419031 858 ntBASIC6.48□□□□□ -1.37
ATF4P18848 Z99497.1-201ENST00000421282 135 ntBASIC6.48□□□□□ -1.37
ATF4P18848 ISX-AS1-201ENST00000427881 202 ntTSL 3 BASIC6.48□□□□□ -1.37
ATF4P18848 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.48□□□□□ -1.37
ATF4P18848 RPL12P14-201ENST00000431782 490 ntBASIC6.48□□□□□ -1.37
ATF4P18848 CCNB1IP1P2-201ENST00000432876 818 ntBASIC6.48□□□□□ -1.37
ATF4P18848 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ATF4P18848 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.48□□□□□ -1.37
ATF4P18848 ASH2LP1-201ENST00000438037 985 ntBASIC6.48□□□□□ -1.37
ATF4P18848 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC6.48□□□□□ -1.37
ATF4P18848 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC6.48□□□□□ -1.37
ATF4P18848 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.48□□□□□ -1.37
ATF4P18848 AC093655.1-201ENST00000446187 641 ntTSL 5 BASIC6.48□□□□□ -1.37
ATF4P18848 AC023137.1-201ENST00000448241 308 ntTSL 4 BASIC6.48□□□□□ -1.37
ATF4P18848 LDHAP3-201ENST00000448312 1008 ntBASIC6.48□□□□□ -1.37
ATF4P18848 AC073188.4-201ENST00000450077 528 ntTSL 4 BASIC6.48□□□□□ -1.37
ATF4P18848 AL390728.3-201ENST00000452704 270 ntBASIC6.48□□□□□ -1.37
ATF4P18848 OSBPL10-AS1-207ENST00000455961 411 ntTSL 2 BASIC6.48□□□□□ -1.37
ATF4P18848 SOX2-OT-202ENST00000461063 566 ntTSL 3 BASIC6.48□□□□□ -1.37
ATF4P18848 RPL19P13-201ENST00000483119 583 ntBASIC6.48□□□□□ -1.37
ATF4P18848 RPS10P16-201ENST00000483812 496 ntBASIC6.48□□□□□ -1.37
ATF4P18848 RN7SL28P-201ENST00000488836 298 ntBASIC6.48□□□□□ -1.37
ATF4P18848 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ATF4P18848 AC112198.1-201ENST00000505369 1220 ntBASIC6.48□□□□□ -1.37
ATF4P18848 AC010424.1-201ENST00000506336 297 ntBASIC6.48□□□□□ -1.37
ATF4P18848 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC6.48□□□□□ -1.37
ATF4P18848 LINC01411-204ENST00000510234 938 ntTSL 3 BASIC6.48□□□□□ -1.37
ATF4P18848 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC6.48□□□□□ -1.37
ATF4P18848 TBCA-206ENST00000518338 551 ntTSL 2 BASIC6.48□□□□□ -1.37
ATF4P18848 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.48□□□□□ -1.37
ATF4P18848 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC6.48□□□□□ -1.37
ATF4P18848 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC6.48□□□□□ -1.37
ATF4P18848 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.48□□□□□ -1.37
ATF4P18848 AP000757.1-202ENST00000525260 891 ntTSL 3 BASIC6.48□□□□□ -1.37
ATF4P18848 HIGD1AP10-201ENST00000527837 282 ntBASIC6.48□□□□□ -1.37
ATF4P18848 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.48□□□□□ -1.37
ATF4P18848 AP002892.2-201ENST00000544195 560 ntTSL 4 BASIC6.48□□□□□ -1.37
ATF4P18848 COX5AP2-201ENST00000554418 394 ntBASIC6.48□□□□□ -1.37
ATF4P18848 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC6.48□□□□□ -1.37
ATF4P18848 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.48□□□□□ -1.37
ATF4P18848 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC6.48□□□□□ -1.37
ATF4P18848 AC118658.1-201ENST00000560221 334 ntTSL 5 BASIC6.48□□□□□ -1.37
ATF4P18848 HP-207ENST00000562526 685 ntTSL 3 BASIC6.48□□□□□ -1.37
ATF4P18848 AC010536.2-201ENST00000563036 338 ntTSL 3 BASIC6.48□□□□□ -1.37
ATF4P18848 AC026458.1-201ENST00000564330 438 ntBASIC6.48□□□□□ -1.37
ATF4P18848 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC6.48□□□□□ -1.37
ATF4P18848 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.48□□□□□ -1.37
ATF4P18848 RN7SL118P-201ENST00000580570 302 ntBASIC6.48□□□□□ -1.37
ATF4P18848 AC026254.4-201ENST00000581118 454 ntTSL 2 BASIC6.48□□□□□ -1.37
ATF4P18848 AC005379.1-201ENST00000585647 328 ntTSL 2 BASIC6.48□□□□□ -1.37
ATF4P18848 ZNF793-AS1-205ENST00000589025 560 ntTSL 2 BASIC6.48□□□□□ -1.37
ATF4P18848 AC004257.1-201ENST00000593588 277 ntTSL 5 BASIC6.48□□□□□ -1.37
ATF4P18848 LINC01515-207ENST00000598092 496 ntTSL 3 BASIC6.48□□□□□ -1.37
ATF4P18848 AC068790.6-201ENST00000602558 258 ntBASIC6.48□□□□□ -1.37
ATF4P18848 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC6.48□□□□□ -1.37
ATF4P18848 AL022324.3-201ENST00000609330 747 ntBASIC6.48□□□□□ -1.37
ATF4P18848 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC6.48□□□□□ -1.37
ATF4P18848 TTR-205ENST00000613781 556 ntTSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms