Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CTLA4P16410 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.29□□□□□ -1.56
CTLA4P16410 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CTLA4P16410 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CTLA4P16410 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CTLA4P16410 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
CTLA4P16410 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CTLA4P16410 AL591135.1-201ENST00000401578 5914 ntBASIC5.28□□□□□ -1.56
CTLA4P16410 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CTLA4P16410 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CTLA4P16410 KYNUP3-201ENST00000574386 1341 ntBASIC5.28□□□□□ -1.56
CTLA4P16410 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
CTLA4P16410 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CTLA4P16410 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.28□□□□□ -1.56
CTLA4P16410 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.28□□□□□ -1.56
CTLA4P16410 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CTLA4P16410 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CTLA4P16410 SNRPEP6-201ENST00000407465 277 ntBASIC5.28□□□□□ -1.56
CTLA4P16410 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.28□□□□□ -1.56
CTLA4P16410 THEM7P-201ENST00000419556 672 ntBASIC5.28□□□□□ -1.56
CTLA4P16410 AL139158.1-201ENST00000424719 340 ntBASIC5.28□□□□□ -1.56
CTLA4P16410 AC099677.3-201ENST00000427081 395 ntBASIC5.28□□□□□ -1.56
CTLA4P16410 AL590399.2-201ENST00000427536 309 ntBASIC5.28□□□□□ -1.56
CTLA4P16410 OSTCP1-201ENST00000455507 450 ntBASIC5.28□□□□□ -1.56
CTLA4P16410 RN7SL254P-201ENST00000460609 284 ntBASIC5.28□□□□□ -1.56
CTLA4P16410 PFN1P6-201ENST00000476786 399 ntBASIC5.28□□□□□ -1.56
CTLA4P16410 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CTLA4P16410 RPL38P3-201ENST00000484463 213 ntBASIC5.28□□□□□ -1.56
CTLA4P16410 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.28□□□□□ -1.56
CTLA4P16410 AC112484.3-201ENST00000505910 329 ntBASIC5.28□□□□□ -1.56
CTLA4P16410 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.28□□□□□ -1.56
CTLA4P16410 AC110056.1-201ENST00000525759 911 ntBASIC5.28□□□□□ -1.56
CTLA4P16410 AP003033.2-201ENST00000528901 805 ntBASIC5.28□□□□□ -1.56
CTLA4P16410 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.28□□□□□ -1.56
CTLA4P16410 OR4A41P-201ENST00000533053 928 ntBASIC5.28□□□□□ -1.56
CTLA4P16410 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.28□□□□□ -1.56
CTLA4P16410 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.28□□□□□ -1.56
CTLA4P16410 AC007346.2-201ENST00000564816 892 ntBASIC5.28□□□□□ -1.56
CTLA4P16410 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CTLA4P16410 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.28□□□□□ -1.56
CTLA4P16410 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.28□□□□□ -1.56
CTLA4P16410 AC092681.3-201ENST00000609463 678 ntBASIC5.28□□□□□ -1.56
CTLA4P16410 uc_338.31-201ENST00000615595 186 ntBASIC5.28□□□□□ -1.56
CTLA4P16410 FAM27E2-201ENST00000619668 403 ntBASIC5.28□□□□□ -1.56
CTLA4P16410 AC021422.1-201ENST00000621212 473 ntBASIC5.28□□□□□ -1.56
CTLA4P16410 AL109924.4-201ENST00000623089 670 ntBASIC5.28□□□□□ -1.56
CTLA4P16410 AC073488.3-201ENST00000631611 778 ntBASIC5.28□□□□□ -1.56
CTLA4P16410 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CTLA4P16410 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CTLA4P16410 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.28□□□□□ -1.56
CTLA4P16410 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CTLA4P16410 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.28□□□□□ -1.56
CTLA4P16410 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CTLA4P16410 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CTLA4P16410 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTLA4P16410 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CTLA4P16410 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTLA4P16410 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTLA4P16410 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
CTLA4P16410 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTLA4P16410 AC009135.2-201ENST00000624136 1768 ntBASIC5.27□□□□□ -1.57
CTLA4P16410 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTLA4P16410 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTLA4P16410 RN7SKP128-201ENST00000364270 303 ntBASIC5.27□□□□□ -1.57
CTLA4P16410 RNA5SP279-201ENST00000365513 117 ntBASIC5.27□□□□□ -1.57
CTLA4P16410 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CTLA4P16410 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTLA4P16410 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTLA4P16410 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CTLA4P16410 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.27□□□□□ -1.57
CTLA4P16410 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.27□□□□□ -1.57
CTLA4P16410 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.27□□□□□ -1.57
CTLA4P16410 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.27□□□□□ -1.57
CTLA4P16410 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.27□□□□□ -1.57
CTLA4P16410 AC096632.2-201ENST00000438139 1239 ntBASIC5.27□□□□□ -1.57
CTLA4P16410 KRT8P51-201ENST00000438938 274 ntBASIC5.27□□□□□ -1.57
CTLA4P16410 AL353662.1-201ENST00000439099 327 ntBASIC5.27□□□□□ -1.57
CTLA4P16410 RPS7P3-201ENST00000443360 580 ntBASIC5.27□□□□□ -1.57
CTLA4P16410 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CTLA4P16410 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.27□□□□□ -1.57
CTLA4P16410 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.27□□□□□ -1.57
CTLA4P16410 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.27□□□□□ -1.57
CTLA4P16410 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.27□□□□□ -1.57
CTLA4P16410 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.27□□□□□ -1.57
CTLA4P16410 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.27□□□□□ -1.57
CTLA4P16410 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.27□□□□□ -1.57
CTLA4P16410 AC090424.1-201ENST00000535243 736 ntBASIC5.27□□□□□ -1.57
CTLA4P16410 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CTLA4P16410 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.27□□□□□ -1.57
CTLA4P16410 AC121758.1-202ENST00000556917 658 ntBASIC5.27□□□□□ -1.57
CTLA4P16410 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.27□□□□□ -1.57
CTLA4P16410 DNM1P47-203ENST00000571780 12667 ntBASIC5.27□□□□□ -1.57
CTLA4P16410 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.27□□□□□ -1.57
CTLA4P16410 AC068768.2-201ENST00000602352 343 ntBASIC5.27□□□□□ -1.57
CTLA4P16410 AC005828.7-201ENST00000607331 556 ntBASIC5.27□□□□□ -1.57
CTLA4P16410 MIR6721-201ENST00000617181 87 ntBASIC5.27□□□□□ -1.57
CTLA4P16410 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.27□□□□□ -1.57
CTLA4P16410 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.27□□□□□ -1.57
CTLA4P16410 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.27□□□□□ -1.57
CTLA4P16410 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms