Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NCK1P16333 NLRP3P1-201ENST00000622303 1785 ntBASIC5.62□□□□□ -1.51
NCK1P16333 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NCK1P16333 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
NCK1P16333 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NCK1P16333 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
NCK1P16333 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
NCK1P16333 AC140479.2-201ENST00000421567 3130 ntBASIC5.62□□□□□ -1.51
NCK1P16333 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NCK1P16333 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.62□□□□□ -1.51
NCK1P16333 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NCK1P16333 MIR138-2-201ENST00000384916 84 ntBASIC5.62□□□□□ -1.51
NCK1P16333 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.62□□□□□ -1.51
NCK1P16333 NME1P1-201ENST00000420914 382 ntBASIC5.62□□□□□ -1.51
NCK1P16333 AP003385.1-201ENST00000426387 893 ntBASIC5.62□□□□□ -1.51
NCK1P16333 RPL5P2-201ENST00000429598 854 ntBASIC5.62□□□□□ -1.51
NCK1P16333 AC099670.2-201ENST00000435130 321 ntBASIC5.62□□□□□ -1.51
NCK1P16333 BMS1P11-201ENST00000442351 885 ntBASIC5.62□□□□□ -1.51
NCK1P16333 AC073072.2-201ENST00000447425 348 ntBASIC5.62□□□□□ -1.51
NCK1P16333 BMS1P9-201ENST00000457640 885 ntBASIC5.62□□□□□ -1.51
NCK1P16333 RN7SL836P-201ENST00000476140 296 ntBASIC5.62□□□□□ -1.51
NCK1P16333 AC079080.1-201ENST00000479841 822 ntBASIC5.62□□□□□ -1.51
NCK1P16333 RPL34P33-201ENST00000486062 334 ntBASIC5.62□□□□□ -1.51
NCK1P16333 RPL5P33-201ENST00000487833 905 ntBASIC5.62□□□□□ -1.51
NCK1P16333 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.62□□□□□ -1.51
NCK1P16333 AC093816.1-201ENST00000515076 913 ntBASIC5.62□□□□□ -1.51
NCK1P16333 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.62□□□□□ -1.51
NCK1P16333 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.62□□□□□ -1.51
NCK1P16333 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.62□□□□□ -1.51
NCK1P16333 CHEK2P2-201ENST00000554701 672 ntBASIC5.62□□□□□ -1.51
NCK1P16333 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC5.62□□□□□ -1.51
NCK1P16333 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.62□□□□□ -1.51
NCK1P16333 RN7SL32P-201ENST00000580514 281 ntBASIC5.62□□□□□ -1.51
NCK1P16333 AL133481.2-203ENST00000607558 139 ntBASIC5.62□□□□□ -1.51
NCK1P16333 AL355974.3-201ENST00000617383 467 ntBASIC5.62□□□□□ -1.51
NCK1P16333 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.62□□□□□ -1.51
NCK1P16333 AL357153.4-201ENST00000620487 1016 ntBASIC5.62□□□□□ -1.51
NCK1P16333 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.62□□□□□ -1.51
NCK1P16333 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.62□□□□□ -1.51
NCK1P16333 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NCK1P16333 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NCK1P16333 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NCK1P16333 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NCK1P16333 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NCK1P16333 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NCK1P16333 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
NCK1P16333 AC116158.1-201ENST00000560231 2129 ntBASIC5.62□□□□□ -1.51
NCK1P16333 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NCK1P16333 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.61□□□□□ -1.51
NCK1P16333 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
NCK1P16333 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
NCK1P16333 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NCK1P16333 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NCK1P16333 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NCK1P16333 RNU105B-201ENST00000364478 208 ntBASIC5.61□□□□□ -1.51
NCK1P16333 RNA5SP85-201ENST00000365378 119 ntBASIC5.61□□□□□ -1.51
NCK1P16333 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
NCK1P16333 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
NCK1P16333 AL033519.1-201ENST00000407266 307 ntBASIC5.61□□□□□ -1.51
NCK1P16333 AL096829.1-201ENST00000413677 457 ntBASIC5.61□□□□□ -1.51
NCK1P16333 MTND2P12-201ENST00000417560 1252 ntBASIC5.61□□□□□ -1.51
NCK1P16333 ELOBP4-201ENST00000423418 296 ntBASIC5.61□□□□□ -1.51
NCK1P16333 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NCK1P16333 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.61□□□□□ -1.51
NCK1P16333 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.61□□□□□ -1.51
NCK1P16333 BX276092.6-201ENST00000430476 250 ntBASIC5.61□□□□□ -1.51
NCK1P16333 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.61□□□□□ -1.51
NCK1P16333 HMGN1P32-201ENST00000441744 256 ntBASIC5.61□□□□□ -1.51
NCK1P16333 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
NCK1P16333 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
NCK1P16333 OR52I1-201ENST00000450052 1050 ntBASIC5.61□□□□□ -1.51
NCK1P16333 BX276092.8-201ENST00000455722 250 ntBASIC5.61□□□□□ -1.51
NCK1P16333 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NCK1P16333 RN7SL39P-201ENST00000462264 297 ntBASIC5.61□□□□□ -1.51
NCK1P16333 AL603882.1-201ENST00000463059 681 ntBASIC5.61□□□□□ -1.51
NCK1P16333 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.61□□□□□ -1.51
NCK1P16333 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
NCK1P16333 KHDC1P1-201ENST00000511053 508 ntBASIC5.61□□□□□ -1.51
NCK1P16333 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.61□□□□□ -1.51
NCK1P16333 AC097486.1-201ENST00000515331 210 ntBASIC5.61□□□□□ -1.51
NCK1P16333 MINOS1P4-201ENST00000515470 318 ntBASIC5.61□□□□□ -1.51
NCK1P16333 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.61□□□□□ -1.51
NCK1P16333 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.61□□□□□ -1.51
NCK1P16333 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.61□□□□□ -1.51
NCK1P16333 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.61□□□□□ -1.51
NCK1P16333 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.61□□□□□ -1.51
NCK1P16333 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.61□□□□□ -1.51
NCK1P16333 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.61□□□□□ -1.51
NCK1P16333 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.61□□□□□ -1.51
NCK1P16333 AC026898.1-201ENST00000586404 571 ntBASIC5.61□□□□□ -1.51
NCK1P16333 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.61□□□□□ -1.51
NCK1P16333 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC5.61□□□□□ -1.51
NCK1P16333 SNORA74.4-201ENST00000607595 199 ntBASIC5.61□□□□□ -1.51
NCK1P16333 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NCK1P16333 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.61□□□□□ -1.51
NCK1P16333 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.61□□□□□ -1.51
NCK1P16333 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
NCK1P16333 AC022400.9-201ENST00000623633 273 ntBASIC5.61□□□□□ -1.51
NCK1P16333 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.61□□□□□ -1.51
NCK1P16333 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms