Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.33□□□□□ -1.4
FAM228BP0C875 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.33□□□□□ -1.4
FAM228BP0C875 AC023141.3-201ENST00000436698 278 ntBASIC6.33□□□□□ -1.4
FAM228BP0C875 AL663074.2-201ENST00000440621 479 ntBASIC6.33□□□□□ -1.4
FAM228BP0C875 RPS7P3-201ENST00000443360 580 ntBASIC6.33□□□□□ -1.4
FAM228BP0C875 RPL12P39-201ENST00000455456 496 ntBASIC6.33□□□□□ -1.4
FAM228BP0C875 AC004890.1-201ENST00000461005 181 ntBASIC6.33□□□□□ -1.4
FAM228BP0C875 AC083795.1-201ENST00000491760 320 ntBASIC6.33□□□□□ -1.4
FAM228BP0C875 MIR2117-201ENST00000516780 80 ntBASIC6.33□□□□□ -1.4
FAM228BP0C875 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.33□□□□□ -1.4
FAM228BP0C875 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.33□□□□□ -1.4
FAM228BP0C875 MRPS21P8-201ENST00000569196 235 ntBASIC6.33□□□□□ -1.4
FAM228BP0C875 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
FAM228BP0C875 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.33□□□□□ -1.4
FAM228BP0C875 AL135999.3-201ENST00000610501 812 ntBASIC6.33□□□□□ -1.4
FAM228BP0C875 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.33□□□□□ -1.4
FAM228BP0C875 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.33□□□□□ -1.4
FAM228BP0C875 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.33□□□□□ -1.4
FAM228BP0C875 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
FAM228BP0C875 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
FAM228BP0C875 AC004076.2-201ENST00000620532 3323 ntBASIC6.33□□□□□ -1.4
FAM228BP0C875 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
FAM228BP0C875 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
FAM228BP0C875 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
FAM228BP0C875 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
FAM228BP0C875 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.32□□□□□ -1.4
FAM228BP0C875 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.32□□□□□ -1.4
FAM228BP0C875 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.32□□□□□ -1.4
FAM228BP0C875 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.32□□□□□ -1.4
FAM228BP0C875 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.32□□□□□ -1.4
FAM228BP0C875 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
FAM228BP0C875 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FAM228BP0C875 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FAM228BP0C875 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
FAM228BP0C875 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FAM228BP0C875 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
FAM228BP0C875 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.32□□□□□ -1.4
FAM228BP0C875 AC130360.1-201ENST00000425489 1117 ntBASIC6.32□□□□□ -1.4
FAM228BP0C875 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
FAM228BP0C875 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.32□□□□□ -1.4
FAM228BP0C875 AC079080.1-201ENST00000479841 822 ntBASIC6.32□□□□□ -1.4
FAM228BP0C875 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.32□□□□□ -1.4
FAM228BP0C875 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.32□□□□□ -1.4
FAM228BP0C875 AC136777.2-201ENST00000522979 358 ntBASIC6.32□□□□□ -1.4
FAM228BP0C875 AC110056.1-201ENST00000525759 911 ntBASIC6.32□□□□□ -1.4
FAM228BP0C875 AC130365.2-201ENST00000525882 1201 ntBASIC6.32□□□□□ -1.4
FAM228BP0C875 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.32□□□□□ -1.4
FAM228BP0C875 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.32□□□□□ -1.4
FAM228BP0C875 NPIPB14P-203ENST00000532298 987 ntBASIC6.32□□□□□ -1.4
FAM228BP0C875 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.32□□□□□ -1.4
FAM228BP0C875 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.32□□□□□ -1.4
FAM228BP0C875 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.32□□□□□ -1.4
FAM228BP0C875 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FAM228BP0C875 AC004232.2-201ENST00000574245 821 ntBASIC6.32□□□□□ -1.4
FAM228BP0C875 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.32□□□□□ -1.4
FAM228BP0C875 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.32□□□□□ -1.4
FAM228BP0C875 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.32□□□□□ -1.4
FAM228BP0C875 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.32□□□□□ -1.4
FAM228BP0C875 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.32□□□□□ -1.4
FAM228BP0C875 AL138693.1-201ENST00000622219 129 ntBASIC6.32□□□□□ -1.4
FAM228BP0C875 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.32□□□□□ -1.4
FAM228BP0C875 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FAM228BP0C875 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
FAM228BP0C875 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
FAM228BP0C875 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FAM228BP0C875 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.32□□□□□ -1.4
FAM228BP0C875 AC025470.1-201ENST00000510053 2032 ntBASIC6.32□□□□□ -1.4
FAM228BP0C875 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.31□□□□□ -1.4
FAM228BP0C875 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.31□□□□□ -1.4
FAM228BP0C875 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.31□□□□□ -1.4
FAM228BP0C875 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.31□□□□□ -1.4
FAM228BP0C875 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
FAM228BP0C875 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
FAM228BP0C875 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.31□□□□□ -1.4
FAM228BP0C875 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.31□□□□□ -1.4
FAM228BP0C875 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
FAM228BP0C875 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.31□□□□□ -1.4
FAM228BP0C875 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
FAM228BP0C875 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
FAM228BP0C875 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.31□□□□□ -1.4
FAM228BP0C875 SNRPEP6-201ENST00000407465 277 ntBASIC6.31□□□□□ -1.4
FAM228BP0C875 RN7SKP38-201ENST00000410782 309 ntBASIC6.31□□□□□ -1.4
FAM228BP0C875 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.31□□□□□ -1.4
FAM228BP0C875 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.31□□□□□ -1.4
FAM228BP0C875 RPL7AP51-201ENST00000422016 760 ntBASIC6.31□□□□□ -1.4
FAM228BP0C875 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
FAM228BP0C875 AC010240.2-201ENST00000445363 1205 ntBASIC6.31□□□□□ -1.4
FAM228BP0C875 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.31□□□□□ -1.4
FAM228BP0C875 PDCL3P4-201ENST00000489621 720 ntBASIC6.31□□□□□ -1.4
FAM228BP0C875 SNRPCP11-201ENST00000492453 205 ntBASIC6.31□□□□□ -1.4
FAM228BP0C875 RN7SL284P-201ENST00000498823 275 ntBASIC6.31□□□□□ -1.4
FAM228BP0C875 AC008629.2-201ENST00000503783 483 ntBASIC6.31□□□□□ -1.4
FAM228BP0C875 OR7E99P-201ENST00000505750 922 ntBASIC6.31□□□□□ -1.4
FAM228BP0C875 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.31□□□□□ -1.4
FAM228BP0C875 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.31□□□□□ -1.4
FAM228BP0C875 AC233699.1-201ENST00000569955 1168 ntBASIC6.31□□□□□ -1.4
FAM228BP0C875 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.31□□□□□ -1.4
FAM228BP0C875 AL133481.2-203ENST00000607558 139 ntBASIC6.31□□□□□ -1.4
FAM228BP0C875 AC022400.9-201ENST00000623633 273 ntBASIC6.31□□□□□ -1.4
FAM228BP0C875 AC073488.6-201ENST00000632293 754 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms