Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CTSDP07339 OFD1P15Y-201ENST00000411536 1392 ntBASIC5□□□□□ -1.61
CTSDP07339 AC011416.1-201ENST00000514947 1732 ntBASIC5□□□□□ -1.61
CTSDP07339 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CTSDP07339 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CTSDP07339 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
CTSDP07339 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5□□□□□ -1.61
CTSDP07339 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CTSDP07339 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CTSDP07339 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CTSDP07339 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CTSDP07339 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC4.99□□□□□ -1.61
CTSDP07339 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CTSDP07339 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CTSDP07339 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CTSDP07339 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CTSDP07339 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CTSDP07339 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CTSDP07339 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.99□□□□□ -1.61
CTSDP07339 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CTSDP07339 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CTSDP07339 AC026310.1-201ENST00000396004 378 ntBASIC4.99□□□□□ -1.61
CTSDP07339 PEX12P1-201ENST00000400284 1048 ntBASIC4.99□□□□□ -1.61
CTSDP07339 RPL21P50-201ENST00000417698 477 ntBASIC4.99□□□□□ -1.61
CTSDP07339 RPS27AP6-201ENST00000427962 448 ntBASIC4.99□□□□□ -1.61
CTSDP07339 AC138761.5-201ENST00000433967 325 ntBASIC4.99□□□□□ -1.61
CTSDP07339 PSMD8P1-201ENST00000436275 769 ntBASIC4.99□□□□□ -1.61
CTSDP07339 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.99□□□□□ -1.61
CTSDP07339 AC234771.4-201ENST00000441416 730 ntBASIC4.99□□□□□ -1.61
CTSDP07339 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC4.99□□□□□ -1.61
CTSDP07339 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC4.99□□□□□ -1.61
CTSDP07339 RPL31P11-202ENST00000454082 372 ntBASIC4.99□□□□□ -1.61
CTSDP07339 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC4.99□□□□□ -1.61
CTSDP07339 AC063955.1-201ENST00000462872 685 ntBASIC4.99□□□□□ -1.61
CTSDP07339 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC4.99□□□□□ -1.61
CTSDP07339 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.99□□□□□ -1.61
CTSDP07339 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CTSDP07339 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CTSDP07339 IGKV1OR22-1-201ENST00000521497 360 ntBASIC4.99□□□□□ -1.61
CTSDP07339 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.99□□□□□ -1.61
CTSDP07339 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.99□□□□□ -1.61
CTSDP07339 AC084824.2-201ENST00000548906 345 ntBASIC4.99□□□□□ -1.61
CTSDP07339 AC126615.2-201ENST00000553003 515 ntBASIC4.99□□□□□ -1.61
CTSDP07339 HMGN1P26-201ENST00000558737 303 ntBASIC4.99□□□□□ -1.61
CTSDP07339 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC4.99□□□□□ -1.61
CTSDP07339 MIR4433B-201ENST00000581329 102 ntBASIC4.99□□□□□ -1.61
CTSDP07339 AC036176.3-201ENST00000602456 418 ntBASIC4.99□□□□□ -1.61
CTSDP07339 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC4.99□□□□□ -1.61
CTSDP07339 IGKV2OR2-7-201ENST00000604652 304 ntBASIC4.99□□□□□ -1.61
CTSDP07339 U91328.4-201ENST00000608919 517 ntBASIC4.99□□□□□ -1.61
CTSDP07339 AL589743.6-201ENST00000611025 117 ntBASIC4.99□□□□□ -1.61
CTSDP07339 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC4.99□□□□□ -1.61
CTSDP07339 AC022400.9-201ENST00000623633 273 ntBASIC4.99□□□□□ -1.61
CTSDP07339 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.99□□□□□ -1.61
CTSDP07339 CLUHP10-201ENST00000631979 980 ntBASIC4.99□□□□□ -1.61
CTSDP07339 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CTSDP07339 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CTSDP07339 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CTSDP07339 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CTSDP07339 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CTSDP07339 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CTSDP07339 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.99□□□□□ -1.61
CTSDP07339 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
CTSDP07339 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC4.99□□□□□ -1.61
CTSDP07339 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.99□□□□□ -1.61
CTSDP07339 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
CTSDP07339 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.98□□□□□ -1.61
CTSDP07339 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
CTSDP07339 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTSDP07339 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTSDP07339 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTSDP07339 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.98□□□□□ -1.61
CTSDP07339 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.98□□□□□ -1.61
CTSDP07339 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.98□□□□□ -1.61
CTSDP07339 AL034546.1-201ENST00000623740 3693 ntBASIC4.98□□□□□ -1.61
CTSDP07339 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
CTSDP07339 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.98□□□□□ -1.61
CTSDP07339 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.98□□□□□ -1.61
CTSDP07339 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTSDP07339 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTSDP07339 AC010894.1-201ENST00000313760 361 ntBASIC4.98□□□□□ -1.61
CTSDP07339 RNA5SP308-201ENST00000362532 115 ntBASIC4.98□□□□□ -1.61
CTSDP07339 RNU1-5P-201ENST00000362684 144 ntBASIC4.98□□□□□ -1.61
CTSDP07339 RNU105B-201ENST00000364478 208 ntBASIC4.98□□□□□ -1.61
CTSDP07339 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTSDP07339 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CTSDP07339 AC087752.1-201ENST00000391360 558 ntBASIC4.98□□□□□ -1.61
CTSDP07339 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTSDP07339 RN7SKP279-201ENST00000411383 298 ntBASIC4.98□□□□□ -1.61
CTSDP07339 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.98□□□□□ -1.61
CTSDP07339 RPS15AP30-201ENST00000420976 390 ntBASIC4.98□□□□□ -1.61
CTSDP07339 AC002127.1-201ENST00000421305 225 ntBASIC4.98□□□□□ -1.61
CTSDP07339 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC4.98□□□□□ -1.61
CTSDP07339 CRIP1P1-201ENST00000427567 185 ntBASIC4.98□□□□□ -1.61
CTSDP07339 CCNB1IP1P1-201ENST00000428976 839 ntBASIC4.98□□□□□ -1.61
CTSDP07339 AC112492.2-201ENST00000432774 1030 ntBASIC4.98□□□□□ -1.61
CTSDP07339 NPM1P18-201ENST00000434232 732 ntBASIC4.98□□□□□ -1.61
CTSDP07339 AL512593.1-201ENST00000444758 779 ntBASIC4.98□□□□□ -1.61
CTSDP07339 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC4.98□□□□□ -1.61
CTSDP07339 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms