Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.9□□□□□ -1.46
TNFP01375 AC012146.2-201ENST00000576545 416 ntBASIC5.9□□□□□ -1.46
TNFP01375 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TNFP01375 COX6CP7-201ENST00000597056 208 ntBASIC5.9□□□□□ -1.46
TNFP01375 AC027243.2-201ENST00000602530 724 ntBASIC5.9□□□□□ -1.46
TNFP01375 FAM27E4-201ENST00000605259 342 ntBASIC5.9□□□□□ -1.46
TNFP01375 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.9□□□□□ -1.46
TNFP01375 AL021918.2-201ENST00000613415 194 ntBASIC5.9□□□□□ -1.46
TNFP01375 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.9□□□□□ -1.46
TNFP01375 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.9□□□□□ -1.46
TNFP01375 MIR4302-201ENST00000638058 60 ntBASIC5.9□□□□□ -1.46
TNFP01375 OR8G3P-202ENST00000641572 1255 ntBASIC5.9□□□□□ -1.46
TNFP01375 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
TNFP01375 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.9□□□□□ -1.47
TNFP01375 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
TNFP01375 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
TNFP01375 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
TNFP01375 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
TNFP01375 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
TNFP01375 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
TNFP01375 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.9□□□□□ -1.47
TNFP01375 LINC01616-201ENST00000561816 2280 ntBASIC5.9□□□□□ -1.47
TNFP01375 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
TNFP01375 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TNFP01375 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.89□□□□□ -1.47
TNFP01375 SHQ1P1-201ENST00000437111 1544 ntBASIC5.89□□□□□ -1.47
TNFP01375 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.89□□□□□ -1.47
TNFP01375 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
TNFP01375 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TNFP01375 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TNFP01375 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TNFP01375 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
TNFP01375 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TNFP01375 SELENOWP1-201ENST00000322792 252 ntBASIC5.89□□□□□ -1.47
TNFP01375 TMSB4XP4-201ENST00000323496 618 ntBASIC5.89□□□□□ -1.47
TNFP01375 RN7SKP81-201ENST00000365603 331 ntBASIC5.89□□□□□ -1.47
TNFP01375 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
TNFP01375 SNORA17A-201ENST00000391185 133 ntBASIC5.89□□□□□ -1.47
TNFP01375 AC016739.1-201ENST00000405359 345 ntBASIC5.89□□□□□ -1.47
TNFP01375 RPS3AP2-201ENST00000407190 754 ntBASIC5.89□□□□□ -1.47
TNFP01375 NMD3P2-201ENST00000421815 761 ntBASIC5.89□□□□□ -1.47
TNFP01375 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.89□□□□□ -1.47
TNFP01375 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.89□□□□□ -1.47
TNFP01375 PCBP2P1-201ENST00000437262 977 ntBASIC5.89□□□□□ -1.47
TNFP01375 AC079922.1-201ENST00000443291 359 ntBASIC5.89□□□□□ -1.47
TNFP01375 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.89□□□□□ -1.47
TNFP01375 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.89□□□□□ -1.47
TNFP01375 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TNFP01375 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.89□□□□□ -1.47
TNFP01375 RN7SL165P-201ENST00000477476 291 ntBASIC5.89□□□□□ -1.47
TNFP01375 AC008629.2-201ENST00000503783 483 ntBASIC5.89□□□□□ -1.47
TNFP01375 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC5.89□□□□□ -1.47
TNFP01375 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.89□□□□□ -1.47
TNFP01375 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.89□□□□□ -1.47
TNFP01375 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TNFP01375 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.89□□□□□ -1.47
TNFP01375 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.89□□□□□ -1.47
TNFP01375 RN7SL753P-201ENST00000581238 290 ntBASIC5.89□□□□□ -1.47
TNFP01375 PRELID3BP3-201ENST00000584963 545 ntBASIC5.89□□□□□ -1.47
TNFP01375 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.89□□□□□ -1.47
TNFP01375 AC119403.2-201ENST00000590960 598 ntBASIC5.89□□□□□ -1.47
TNFP01375 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.89□□□□□ -1.47
TNFP01375 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.89□□□□□ -1.47
TNFP01375 MIR6862-1-201ENST00000613016 70 ntBASIC5.89□□□□□ -1.47
TNFP01375 MIR6862-2-201ENST00000614755 70 ntBASIC5.89□□□□□ -1.47
TNFP01375 MIR6729-201ENST00000618194 65 ntBASIC5.89□□□□□ -1.47
TNFP01375 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.89□□□□□ -1.47
TNFP01375 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.89□□□□□ -1.47
TNFP01375 SNORA17.5-201ENST00000630429 132 ntBASIC5.89□□□□□ -1.47
TNFP01375 AC103703.1-201ENST00000634783 663 ntBASIC5.89□□□□□ -1.47
TNFP01375 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.89□□□□□ -1.47
TNFP01375 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.89□□□□□ -1.47
TNFP01375 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TNFP01375 NEPNP-201ENST00000404786 1371 ntBASIC5.89□□□□□ -1.47
TNFP01375 AP000866.6-201ENST00000638898 3579 ntBASIC5.89□□□□□ -1.47
TNFP01375 AC106872.5-201ENST00000508856 1416 ntBASIC5.89□□□□□ -1.47
TNFP01375 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
TNFP01375 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
TNFP01375 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
TNFP01375 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TNFP01375 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.89□□□□□ -1.47
TNFP01375 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TNFP01375 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.88□□□□□ -1.47
TNFP01375 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.88□□□□□ -1.47
TNFP01375 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.88□□□□□ -1.47
TNFP01375 AC015689.2-201ENST00000528172 1738 ntBASIC5.88□□□□□ -1.47
TNFP01375 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.88□□□□□ -1.47
TNFP01375 USP9YP3-201ENST00000434481 1766 ntBASIC5.88□□□□□ -1.47
TNFP01375 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
TNFP01375 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.88□□□□□ -1.47
TNFP01375 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC5.88□□□□□ -1.47
TNFP01375 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.88□□□□□ -1.47
TNFP01375 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.88□□□□□ -1.47
TNFP01375 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.88□□□□□ -1.47
TNFP01375 AC245060.4-201ENST00000413293 1121 ntBASIC5.88□□□□□ -1.47
TNFP01375 CDY17P-201ENST00000414121 1282 ntBASIC5.88□□□□□ -1.47
TNFP01375 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.88□□□□□ -1.47
TNFP01375 RPL36P18-201ENST00000419316 318 ntBASIC5.88□□□□□ -1.47
TNFP01375 AC007562.1-201ENST00000421819 517 ntBASIC5.88□□□□□ -1.47
TNFP01375 KIF4CP-201ENST00000422742 1279 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms