Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.76□□□□□ -1.49
NKX2-2O95096 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.76□□□□□ -1.49
NKX2-2O95096 MTCO1P45-201ENST00000431457 267 ntBASIC5.76□□□□□ -1.49
NKX2-2O95096 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.76□□□□□ -1.49
NKX2-2O95096 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
NKX2-2O95096 GAPDHP23-201ENST00000444823 993 ntBASIC5.76□□□□□ -1.49
NKX2-2O95096 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.76□□□□□ -1.49
NKX2-2O95096 HIGD1AP16-201ENST00000450986 258 ntBASIC5.76□□□□□ -1.49
NKX2-2O95096 RPL7L1P3-201ENST00000455249 689 ntBASIC5.76□□□□□ -1.49
NKX2-2O95096 H3F3AP5-201ENST00000475267 429 ntBASIC5.76□□□□□ -1.49
NKX2-2O95096 RN7SL612P-201ENST00000497704 295 ntBASIC5.76□□□□□ -1.49
NKX2-2O95096 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NKX2-2O95096 AK4P6-201ENST00000505168 528 ntBASIC5.76□□□□□ -1.49
NKX2-2O95096 AP001000.1-201ENST00000526843 742 ntBASIC5.76□□□□□ -1.49
NKX2-2O95096 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.76□□□□□ -1.49
NKX2-2O95096 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.76□□□□□ -1.49
NKX2-2O95096 AC090651.1-201ENST00000567865 634 ntBASIC5.76□□□□□ -1.49
NKX2-2O95096 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.76□□□□□ -1.49
NKX2-2O95096 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.76□□□□□ -1.49
NKX2-2O95096 QTRT1P1-201ENST00000604344 1078 ntBASIC5.76□□□□□ -1.49
NKX2-2O95096 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.76□□□□□ -1.49
NKX2-2O95096 AC005972.3-201ENST00000606304 481 ntBASIC5.76□□□□□ -1.49
NKX2-2O95096 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.76□□□□□ -1.49
NKX2-2O95096 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.76□□□□□ -1.49
NKX2-2O95096 OR7A1P-202ENST00000641542 1158 ntBASIC5.76□□□□□ -1.49
NKX2-2O95096 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NKX2-2O95096 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.76□□□□□ -1.49
NKX2-2O95096 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NKX2-2O95096 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
NKX2-2O95096 AC024651.2-201ENST00000562480 2098 ntBASIC5.76□□□□□ -1.49
NKX2-2O95096 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NKX2-2O95096 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NKX2-2O95096 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
NKX2-2O95096 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
NKX2-2O95096 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.76□□□□□ -1.49
NKX2-2O95096 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NKX2-2O95096 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NKX2-2O95096 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
NKX2-2O95096 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
NKX2-2O95096 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC5.75□□□□□ -1.49
NKX2-2O95096 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NKX2-2O95096 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.75□□□□□ -1.49
NKX2-2O95096 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
NKX2-2O95096 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NKX2-2O95096 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NKX2-2O95096 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NKX2-2O95096 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NKX2-2O95096 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.75□□□□□ -1.49
NKX2-2O95096 AL022323.4-201ENST00000623980 13120 ntBASIC5.75□□□□□ -1.49
NKX2-2O95096 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.75□□□□□ -1.49
NKX2-2O95096 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
NKX2-2O95096 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.75□□□□□ -1.49
NKX2-2O95096 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.75□□□□□ -1.49
NKX2-2O95096 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
NKX2-2O95096 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.75□□□□□ -1.49
NKX2-2O95096 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NKX2-2O95096 MIR191-201ENST00000384873 92 ntBASIC5.75□□□□□ -1.49
NKX2-2O95096 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NKX2-2O95096 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.75□□□□□ -1.49
NKX2-2O95096 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NKX2-2O95096 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.75□□□□□ -1.49
NKX2-2O95096 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.75□□□□□ -1.49
NKX2-2O95096 FAM183DP-201ENST00000421987 399 ntBASIC5.75□□□□□ -1.49
NKX2-2O95096 VN1R20P-201ENST00000425215 966 ntBASIC5.75□□□□□ -1.49
NKX2-2O95096 MTND4LP14-201ENST00000429447 288 ntBASIC5.75□□□□□ -1.49
NKX2-2O95096 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.75□□□□□ -1.49
NKX2-2O95096 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.75□□□□□ -1.49
NKX2-2O95096 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.75□□□□□ -1.49
NKX2-2O95096 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.75□□□□□ -1.49
NKX2-2O95096 AC073594.1-201ENST00000462065 364 ntBASIC5.75□□□□□ -1.49
NKX2-2O95096 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.75□□□□□ -1.49
NKX2-2O95096 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NKX2-2O95096 MTND6P8-201ENST00000503471 522 ntBASIC5.75□□□□□ -1.49
NKX2-2O95096 GOLGA5P1-201ENST00000507317 980 ntBASIC5.75□□□□□ -1.49
NKX2-2O95096 AC095052.1-201ENST00000509955 863 ntBASIC5.75□□□□□ -1.49
NKX2-2O95096 GUSBP9-201ENST00000510138 584 ntBASIC5.75□□□□□ -1.49
NKX2-2O95096 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.75□□□□□ -1.49
NKX2-2O95096 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.75□□□□□ -1.49
NKX2-2O95096 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.75□□□□□ -1.49
NKX2-2O95096 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.75□□□□□ -1.49
NKX2-2O95096 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.75□□□□□ -1.49
NKX2-2O95096 AL121839.1-201ENST00000556233 1185 ntBASIC5.75□□□□□ -1.49
NKX2-2O95096 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.75□□□□□ -1.49
NKX2-2O95096 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.75□□□□□ -1.49
NKX2-2O95096 WBP1LP12-201ENST00000604449 331 ntBASIC5.75□□□□□ -1.49
NKX2-2O95096 AC073575.2-201ENST00000614212 627 ntBASIC5.75□□□□□ -1.49
NKX2-2O95096 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.75□□□□□ -1.49
NKX2-2O95096 LINC00216-201ENST00000623548 1126 ntBASIC5.75□□□□□ -1.49
NKX2-2O95096 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.75□□□□□ -1.49
NKX2-2O95096 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
NKX2-2O95096 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
NKX2-2O95096 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
NKX2-2O95096 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
NKX2-2O95096 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NKX2-2O95096 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NKX2-2O95096 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.75□□□□□ -1.49
NKX2-2O95096 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
NKX2-2O95096 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NKX2-2O95096 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
NKX2-2O95096 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms