Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RGPD3A6NKT7 AC104964.2-201ENST00000562242 4641 ntBASIC7.44□□□□□ -1.22
RGPD3A6NKT7 AC104581.5-201ENST00000624171 7141 ntBASIC7.44□□□□□ -1.22
RGPD3A6NKT7 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
RGPD3A6NKT7 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RGPD3A6NKT7 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC7.44□□□□□ -1.22
RGPD3A6NKT7 AC011815.2-201ENST00000618230 2021 ntBASIC7.44□□□□□ -1.22
RGPD3A6NKT7 PANDAR-201ENST00000629595 1506 ntBASIC7.43□□□□□ -1.22
RGPD3A6NKT7 HIST1H3PS1-201ENST00000404612 417 ntBASIC7.43□□□□□ -1.22
RGPD3A6NKT7 AL390774.1-201ENST00000411924 246 ntBASIC7.43□□□□□ -1.22
RGPD3A6NKT7 AL357752.1-201ENST00000412817 349 ntBASIC7.43□□□□□ -1.22
RGPD3A6NKT7 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 AL360081.1-201ENST00000428299 555 ntBASIC7.43□□□□□ -1.22
RGPD3A6NKT7 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 HSPE1P2-201ENST00000554777 306 ntBASIC7.43□□□□□ -1.22
RGPD3A6NKT7 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 AC000068.2-201ENST00000608816 460 ntBASIC7.43□□□□□ -1.22
RGPD3A6NKT7 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 AL590004.4-201ENST00000566733 7060 ntBASIC7.43□□□□□ -1.22
RGPD3A6NKT7 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 U3.36-201ENST00000408418 213 ntBASIC7.43□□□□□ -1.22
RGPD3A6NKT7 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 AC073594.1-201ENST00000462065 364 ntBASIC7.43□□□□□ -1.22
RGPD3A6NKT7 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 AC092324.1-201ENST00000468671 324 ntBASIC7.43□□□□□ -1.22
RGPD3A6NKT7 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 BMPR1APS2-201ENST00000527904 1012 ntBASIC7.43□□□□□ -1.22
RGPD3A6NKT7 NMNAT1P5-201ENST00000559657 841 ntBASIC7.43□□□□□ -1.22
RGPD3A6NKT7 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 AC009120.2-204ENST00000621548 2032 ntBASIC7.43□□□□□ -1.22
RGPD3A6NKT7 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RGPD3A6NKT7 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
RGPD3A6NKT7 GTF2IP4-201ENST00000453092 2054 ntBASIC7.42□□□□□ -1.22
RGPD3A6NKT7 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RGPD3A6NKT7 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
RGPD3A6NKT7 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
RGPD3A6NKT7 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
RGPD3A6NKT7 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.42□□□□□ -1.22
RGPD3A6NKT7 MIR133B-201ENST00000362210 119 ntBASIC7.42□□□□□ -1.22
RGPD3A6NKT7 RNA5SP319-201ENST00000362768 119 ntBASIC7.42□□□□□ -1.22
RGPD3A6NKT7 RNA5SP335-201ENST00000363817 110 ntBASIC7.42□□□□□ -1.22
RGPD3A6NKT7 ADIG-201ENST00000373348 430 ntTSL 2 BASIC7.42□□□□□ -1.22
RGPD3A6NKT7 CYB5AP4-201ENST00000396692 399 ntBASIC7.42□□□□□ -1.22
RGPD3A6NKT7 AL035419.1-201ENST00000397037 564 ntBASIC7.42□□□□□ -1.22
RGPD3A6NKT7 AC019205.1-201ENST00000421830 730 ntBASIC7.42□□□□□ -1.22
RGPD3A6NKT7 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC7.42□□□□□ -1.22
RGPD3A6NKT7 AL356981.1-201ENST00000454879 684 ntBASIC7.42□□□□□ -1.22
RGPD3A6NKT7 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC7.42□□□□□ -1.22
RGPD3A6NKT7 SCARNA6.1-201ENST00000516989 238 ntBASIC7.42□□□□□ -1.22
RGPD3A6NKT7 AP000662.1-201ENST00000530952 487 ntBASIC7.42□□□□□ -1.22
RGPD3A6NKT7 OR11J2P-201ENST00000555298 907 ntBASIC7.42□□□□□ -1.22
RGPD3A6NKT7 OR7A11P-201ENST00000597719 953 ntBASIC7.42□□□□□ -1.22
RGPD3A6NKT7 AC234771.5-201ENST00000600161 514 ntBASIC7.42□□□□□ -1.22
RGPD3A6NKT7 AL021368.3-201ENST00000607119 578 ntBASIC7.42□□□□□ -1.22
RGPD3A6NKT7 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC7.42□□□□□ -1.22
RGPD3A6NKT7 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.42□□□□□ -1.22
RGPD3A6NKT7 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.42□□□□□ -1.22
RGPD3A6NKT7 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RGPD3A6NKT7 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC7.42□□□□□ -1.22
RGPD3A6NKT7 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RGPD3A6NKT7 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
RGPD3A6NKT7 ABCA11P-202ENST00000504019 2110 ntBASIC7.42□□□□□ -1.22
RGPD3A6NKT7 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
RGPD3A6NKT7 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
RGPD3A6NKT7 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
RGPD3A6NKT7 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.41□□□□□ -1.22
RGPD3A6NKT7 ATP8B1-201ENST00000283684 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RGPD3A6NKT7 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.41□□□□□ -1.22
RGPD3A6NKT7 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RGPD3A6NKT7 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RGPD3A6NKT7 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RGPD3A6NKT7 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.41□□□□□ -1.22
RGPD3A6NKT7 AC011753.3-201ENST00000443436 406 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms