Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 OR1F12-201ENST00000402365 945 ntBASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 AC013268.2-201ENST00000420753 337 ntBASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 AL390879.1-201ENST00000439143 386 ntBASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 RPS18P1-201ENST00000447840 458 ntBASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 RBMY2HP-201ENST00000457961 720 ntBASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 MTND3P3-201ENST00000505004 126 ntBASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 AC104997.1-201ENST00000519761 717 ntBASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 HMGN1P26-201ENST00000558737 303 ntBASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 MIR3157-201ENST00000578688 85 ntBASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 NPM1P45-201ENST00000583151 559 ntBASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 AL162233.1-201ENST00000620014 944 ntBASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 AL356490.1-201ENST00000623079 479 ntBASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 RNA5SP110-201ENST00000362638 115 ntBASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 FAR1P1-201ENST00000427163 934 ntBASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 AC013403.1-201ENST00000436954 263 ntBASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 RPL23AP60-201ENST00000450011 454 ntBASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 AC036111.2-201ENST00000533247 901 ntBASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 AL049779.3-201ENST00000557141 606 ntBASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 AC005632.2-201ENST00000564271 828 ntBASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 RPSAP75-201ENST00000605848 301 ntBASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 uc_338.26-201ENST00000612659 160 ntBASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 AL352984.2-202ENST00000613699 155 ntBASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 AC022325.1-201ENST00000502748 2199 ntBASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 MAPK10-261ENST00000641050 3109 ntBASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TCRBV7S3A2A0A539 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms