Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 IGLV3-4-201ENST00000432300 244 ntBASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 RN7SL254P-201ENST00000460609 284 ntBASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 AC112184.1-201ENST00000505179 312 ntBASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 AC108103.1-201ENST00000511286 446 ntBASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 AC026826.3-201ENST00000561747 158 ntBASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 RN7SL261P-201ENST00000613441 282 ntBASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 AL357140.4-201ENST00000636827 412 ntBASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 AC120036.2-201ENST00000509729 1474 ntBASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 CAP1P2-201ENST00000417455 1409 ntBASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4BQ9Y4P1 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 RNA5SP375-201ENST00000362975 119 ntBASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 NPM1P38-201ENST00000403835 865 ntBASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 AC010240.2-201ENST00000445363 1205 ntBASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 RPL7L1P3-201ENST00000455249 689 ntBASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 AP002453.1-201ENST00000492327 668 ntBASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 AC022616.2-201ENST00000523185 300 ntBASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 AC021269.1-201ENST00000526860 705 ntBASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 MRPS21P8-201ENST00000569196 235 ntBASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 OOSP1P2-201ENST00000579644 351 ntBASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 MIR4502-201ENST00000580432 81 ntBASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 MIR4701-201ENST00000583094 63 ntBASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 AP001052.1-201ENST00000626421 99 ntBASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 AC073488.6-201ENST00000632293 754 ntBASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 TTC41P-205ENST00000551270 3963 ntBASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 ICE2P1-201ENST00000512800 1849 ntBASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 AC022325.1-201ENST00000502748 2199 ntBASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4BQ9Y4P1 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 AC007159.1-201ENST00000566529 4706 ntBASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 CDY11P-201ENST00000447168 1651 ntBASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 RAB5CP1-201ENST00000395972 580 ntBASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 RNA5SP156-201ENST00000410250 110 ntBASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 RNA5SP431-201ENST00000410312 120 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms