Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 VSIG1-202ENST00000415430 3236 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 MAPK10-319ENST00000641459 2542 ntBASIC10.38□□□□□ -0.75
PHF8Q9UPP1 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 Z93929.1-201ENST00000418200 1475 ntBASIC10.38□□□□□ -0.75
PHF8Q9UPP1 AL031595.3-201ENST00000624919 14262 ntBASIC10.38□□□□□ -0.75
PHF8Q9UPP1 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 AC099535.1-201ENST00000408928 371 ntBASIC10.38□□□□□ -0.75
PHF8Q9UPP1 RPS26P38-201ENST00000414476 348 ntBASIC10.38□□□□□ -0.75
PHF8Q9UPP1 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 PSMD8P1-201ENST00000436275 769 ntBASIC10.38□□□□□ -0.75
PHF8Q9UPP1 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 AC090835.1-201ENST00000515189 1024 ntBASIC10.38□□□□□ -0.75
PHF8Q9UPP1 IGHV3-32-201ENST00000519182 355 ntBASIC10.38□□□□□ -0.75
PHF8Q9UPP1 IGHVII-51-2-201ENST00000519778 259 ntBASIC10.38□□□□□ -0.75
PHF8Q9UPP1 AC022690.1-201ENST00000526681 550 ntBASIC10.38□□□□□ -0.75
PHF8Q9UPP1 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 CYP1A1-205ENST00000564596 988 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 MIR4795-201ENST00000584182 89 ntBASIC10.38□□□□□ -0.75
PHF8Q9UPP1 COX6CP16-201ENST00000603667 216 ntBASIC10.38□□□□□ -0.75
PHF8Q9UPP1 CTNNA2-209ENST00000466387 4349 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 PHACTR2P1-201ENST00000605639 1414 ntBASIC10.38□□□□□ -0.75
PHF8Q9UPP1 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 LINC00703-202ENST00000454152 2390 ntTSL 2 BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 MYO1E-201ENST00000288235 8673 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 TKTL2-201ENST00000280605 2654 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 AC012360.3-201ENST00000610036 3449 ntBASIC10.38□□□□□ -0.75
PHF8Q9UPP1 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 AL121936.1-201ENST00000641660 2884 ntBASIC10.37□□□□□ -0.75
PHF8Q9UPP1 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 YAP1-203ENST00000524575 1638 ntTSL 2 BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 KARSP1-201ENST00000451871 1752 ntBASIC10.37□□□□□ -0.75
PHF8Q9UPP1 HM13-224ENST00000498035 3932 ntTSL 2 BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 RNU2-18P-201ENST00000411224 162 ntBASIC10.37□□□□□ -0.75
PHF8Q9UPP1 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 AL445235.1-201ENST00000431202 1747 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 AC096632.2-201ENST00000438139 1239 ntBASIC10.37□□□□□ -0.75
PHF8Q9UPP1 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 FAR2P1-206ENST00000449736 709 ntBASIC10.37□□□□□ -0.75
PHF8Q9UPP1 BZW1P1-201ENST00000454901 1240 ntBASIC10.37□□□□□ -0.75
PHF8Q9UPP1 YAP1P2-201ENST00000455104 610 ntBASIC10.37□□□□□ -0.75
PHF8Q9UPP1 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 PGBD4P1-201ENST00000473644 407 ntBASIC10.37□□□□□ -0.75
PHF8Q9UPP1 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 OR5M14P-201ENST00000506803 618 ntBASIC10.37□□□□□ -0.75
PHF8Q9UPP1 ATP1B1P1-201ENST00000509767 915 ntBASIC10.37□□□□□ -0.75
PHF8Q9UPP1 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 AC131935.1-201ENST00000524621 333 ntBASIC10.37□□□□□ -0.75
PHF8Q9UPP1 MIR4800-201ENST00000537353 80 ntBASIC10.37□□□□□ -0.75
PHF8Q9UPP1 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 PSMA3P-201ENST00000555485 635 ntBASIC10.37□□□□□ -0.75
PHF8Q9UPP1 AL355922.4-201ENST00000555642 449 ntTSL 3 BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 CYP2C60P-201ENST00000566088 139 ntBASIC10.37□□□□□ -0.75
PHF8Q9UPP1 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 AC126335.1-201ENST00000568414 510 ntTSL 2 BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 AC012146.2-201ENST00000576545 416 ntBASIC10.37□□□□□ -0.75
PHF8Q9UPP1 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 SEPT7P9-203ENST00000604116 343 ntBASIC10.37□□□□□ -0.75
PHF8Q9UPP1 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 AC019193.2-201ENST00000610012 634 ntBASIC10.37□□□□□ -0.75
PHF8Q9UPP1 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 AL122125.1-201ENST00000616999 600 ntBASIC10.37□□□□□ -0.75
PHF8Q9UPP1 SND1-IT1-201ENST00000623342 2481 ntBASIC10.37□□□□□ -0.75
PHF8Q9UPP1 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 ATE1-AS1-202ENST00000636460 506 ntBASIC10.37□□□□□ -0.75
PHF8Q9UPP1 AC233280.20-201ENST00000637412 416 ntBASIC10.37□□□□□ -0.75
PHF8Q9UPP1 MAGEE1-201ENST00000361470 3630 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 TRIM6-212ENST00000621176 3005 ntTSL 5 BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 WDR11-201ENST00000263461 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 FAM107A-201ENST00000360997 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PHF8Q9UPP1 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC10.37□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 1568 ms