Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PACSIN3Q9UKS6 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 CR788268.1-201ENST00000603931 1809 ntBASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 LCN1P2-201ENST00000372030 223 ntBASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 SNORA70.9-201ENST00000384370 135 ntBASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 AC007064.3-201ENST00000422608 359 ntBASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 RPL3P11-201ENST00000434028 1146 ntBASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 AC092685.1-201ENST00000447960 1243 ntBASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 AL009048.1-201ENST00000450437 298 ntBASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 AC104164.3-201ENST00000467363 1258 ntBASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 RN7SL216P-201ENST00000471607 298 ntBASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 NDUFA5P9-201ENST00000472609 340 ntBASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 SNX18P23-201ENST00000510867 677 ntBASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 IGLC4-201ENST00000517690 248 ntBASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 C1DP5-201ENST00000525775 383 ntBASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 AP001804.1-201ENST00000526868 919 ntBASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 AP003033.1-201ENST00000527244 415 ntBASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 REXO2-218ENST00000544827 880 ntTSL 3 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 AL049874.4-201ENST00000557593 255 ntBASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 AC005632.2-201ENST00000564271 828 ntBASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 AP001160.4-201ENST00000596971 382 ntBASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 AC005479.3-201ENST00000602790 431 ntBASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 RDM1-219ENST00000615378 542 ntTSL 3 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 AP002791.1-201ENST00000623291 381 ntBASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 AC079416.3-201ENST00000624479 549 ntBASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PACSIN3Q9UKS6 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 CCDC150P1-201ENST00000537123 2215 ntBASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 RNU6-819P-201ENST00000364116 107 ntBASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 MIR551B-201ENST00000384984 96 ntBASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 NPM1P36-201ENST00000415681 835 ntBASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 RPS7P12-201ENST00000422385 582 ntBASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 RPP40P1-201ENST00000426762 456 ntBASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 RPL12P28-201ENST00000430852 489 ntBASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 AL022324.2-201ENST00000434827 780 ntBASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 MYL6P3-201ENST00000436904 432 ntBASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 BX679664.2-201ENST00000439282 283 ntBASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 SETD6P1-201ENST00000444575 317 ntBASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 MTND5P8-201ENST00000449817 1083 ntBASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 RN7SL372P-201ENST00000461982 298 ntBASIC6.24□□□□□ -1.41
PACSIN3Q9UKS6 AC063955.1-201ENST00000462872 685 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms