Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 AC002127.1-201ENST00000421305 225 ntBASIC6.03□□□□□ -1.44
BRF2Q9HAW0 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 OR6R1P-201ENST00000431838 940 ntBASIC6.03□□□□□ -1.44
BRF2Q9HAW0 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 GTF3AP6-201ENST00000432585 986 ntBASIC6.03□□□□□ -1.44
BRF2Q9HAW0 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 RANP2-201ENST00000456833 229 ntBASIC6.03□□□□□ -1.44
BRF2Q9HAW0 RN7SL369P-201ENST00000477138 299 ntBASIC6.03□□□□□ -1.44
BRF2Q9HAW0 RN7SL326P-201ENST00000477493 296 ntBASIC6.03□□□□□ -1.44
BRF2Q9HAW0 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 PCNAP1-201ENST00000505363 709 ntBASIC6.03□□□□□ -1.44
BRF2Q9HAW0 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 KHDC1P1-201ENST00000511053 508 ntBASIC6.03□□□□□ -1.44
BRF2Q9HAW0 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 RNA5SP418-201ENST00000515951 117 ntBASIC6.03□□□□□ -1.44
BRF2Q9HAW0 RNU6-491P-201ENST00000516099 110 ntBASIC6.03□□□□□ -1.44
BRF2Q9HAW0 OR6M2P-201ENST00000529831 871 ntBASIC6.03□□□□□ -1.44
BRF2Q9HAW0 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 AC008055.1-201ENST00000547032 609 ntBASIC6.03□□□□□ -1.44
BRF2Q9HAW0 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 AC037479.1-201ENST00000558361 625 ntBASIC6.03□□□□□ -1.44
BRF2Q9HAW0 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 AC090651.1-201ENST00000567865 634 ntBASIC6.03□□□□□ -1.44
BRF2Q9HAW0 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 MIR3159-201ENST00000584572 74 ntBASIC6.03□□□□□ -1.44
BRF2Q9HAW0 AC073111.2-201ENST00000605657 1075 ntBASIC6.03□□□□□ -1.44
BRF2Q9HAW0 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.03□□□□□ -1.44
BRF2Q9HAW0 AC003992.1-201ENST00000635364 557 ntBASIC6.03□□□□□ -1.44
BRF2Q9HAW0 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 AC096921.2-201ENST00000561507 1916 ntBASIC6.03□□□□□ -1.44
BRF2Q9HAW0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
BRF2Q9HAW0 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.02□□□□□ -1.44
BRF2Q9HAW0 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 MTND4LP17-201ENST00000414607 293 ntBASIC6.02□□□□□ -1.45
BRF2Q9HAW0 AC019070.1-201ENST00000415008 1024 ntBASIC6.02□□□□□ -1.45
BRF2Q9HAW0 AL360013.1-201ENST00000419031 858 ntBASIC6.02□□□□□ -1.45
BRF2Q9HAW0 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 AL022324.2-201ENST00000434827 780 ntBASIC6.02□□□□□ -1.45
BRF2Q9HAW0 AC128677.1-201ENST00000436016 442 ntBASIC6.02□□□□□ -1.45
BRF2Q9HAW0 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 RN7SL393P-201ENST00000463588 296 ntBASIC6.02□□□□□ -1.45
BRF2Q9HAW0 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.02□□□□□ -1.45
BRF2Q9HAW0 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 AC008147.3-201ENST00000548666 354 ntBASIC6.02□□□□□ -1.45
BRF2Q9HAW0 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 AC025283.1-201ENST00000572039 734 ntBASIC6.02□□□□□ -1.45
BRF2Q9HAW0 NPIPB1P-202ENST00000588786 828 ntBASIC6.02□□□□□ -1.45
BRF2Q9HAW0 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 AL390877.1-201ENST00000605704 214 ntBASIC6.02□□□□□ -1.45
BRF2Q9HAW0 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.02□□□□□ -1.45
BRF2Q9HAW0 AC073592.7-201ENST00000623659 507 ntBASIC6.02□□□□□ -1.45
BRF2Q9HAW0 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.02□□□□□ -1.45
BRF2Q9HAW0 OR7E91P-202ENST00000642062 1198 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms