Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AL512506.1-201ENST00000613918 449 ntBASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AC089999.3-201ENST00000622440 577 ntBASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AC006511.3-201ENST00000624929 1783 ntBASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 AC022034.1-201ENST00000512867 2156 ntBASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP3Q96JB5 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 AC011815.2-201ENST00000618230 2021 ntBASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 PRELID1P1-201ENST00000403549 660 ntBASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 UBE2V1P15-201ENST00000407776 448 ntBASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 RPL21P50-201ENST00000417698 477 ntBASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 CYP4F30P-202ENST00000420048 405 ntBASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 AC064862.5-201ENST00000440618 334 ntBASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 OR13K1P-201ENST00000444577 975 ntBASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 RN7SL369P-201ENST00000477138 299 ntBASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 NPM1P28-201ENST00000492269 840 ntBASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 AC093816.1-201ENST00000515076 913 ntBASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 IGHV4-55-201ENST00000520889 368 ntBASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 AC008055.1-201ENST00000547032 609 ntBASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 MIR3157-201ENST00000578688 85 ntBASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 AC005332.4-201ENST00000592752 579 ntBASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 AC005479.3-201ENST00000602790 431 ntBASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 AC098483.2-201ENST00000603158 454 ntBASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 AC073111.2-201ENST00000605657 1075 ntBASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 NQO2-209ENST00000606474 470 ntTSL 3 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 AC241377.1-201ENST00000619797 406 ntBASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 MIR6811-201ENST00000620409 58 ntBASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 AL136984.1-201ENST00000607611 1893 ntBASIC7.11□□□□□ -1.27
CDK5RAP3Q96JB5 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 MAPK10-287ENST00000641217 3037 ntBASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 RNU6-618P-201ENST00000363518 112 ntBASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 AP003170.5-201ENST00000397185 335 ntBASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 AL034417.1-201ENST00000399343 800 ntBASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 SMARCE1P1-201ENST00000417747 1186 ntBASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 OSTCP4-201ENST00000424397 449 ntBASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 AL445528.1-201ENST00000426330 420 ntBASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 RPL12P49-201ENST00000441100 121 ntBASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 RPS7P10-201ENST00000464254 603 ntBASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 RN7SL643P-201ENST00000471845 291 ntBASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC7.1□□□□□ -1.27
CDK5RAP3Q96JB5 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms