Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 RNU6-185P-201ENST00000384421 107 ntBASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 RNU6-83P-201ENST00000384568 112 ntBASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 RNU6-244P-201ENST00000391028 104 ntBASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 CNN3P1-201ENST00000401596 935 ntBASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 SPATA20P1-201ENST00000423089 438 ntBASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 AC234781.2-201ENST00000426370 994 ntBASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 AL589823.1-201ENST00000429577 183 ntBASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 KCTD9P1-201ENST00000430462 1167 ntBASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 E2F6P3-201ENST00000441743 743 ntBASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 ELOCP30-201ENST00000447108 299 ntBASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 AL354714.5-201ENST00000450131 590 ntBASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 AURKAPS1-201ENST00000451805 1212 ntBASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 AC011352.1-201ENST00000512300 793 ntBASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 PGAM4P2-201ENST00000512491 721 ntBASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 FABP5P12-201ENST00000515543 389 ntBASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 AC134698.4-201ENST00000523451 826 ntBASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 AC087373.1-201ENST00000524920 491 ntBASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 BCAS2P1-201ENST00000528022 632 ntBASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 MT1B-202ENST00000562399 351 ntTSL 3 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 MIR378C-201ENST00000578683 81 ntBASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 OR52B5P-204ENST00000641744 3467 ntBASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 MAPK10-347ENST00000641762 2856 ntBASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AGTPBP1-202ENST00000357081 4393 ntTSL 5 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 ENSAP3-201ENST00000312710 333 ntBASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 RNA5SP382-201ENST00000363355 112 ntBASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 OR8V1P-201ENST00000395193 873 ntBASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AL138880.1-201ENST00000405824 642 ntBASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 Y_RNA.599-201ENST00000410489 109 ntBASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 RNU4-72P-201ENST00000410754 173 ntBASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AC013404.1-201ENST00000413068 249 ntBASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 SEPT2P1-201ENST00000419651 180 ntBASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 GAPDHP51-201ENST00000426454 1000 ntBASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 MYL6P3-201ENST00000436904 432 ntBASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 MTND2P20-201ENST00000440805 661 ntBASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AL096803.1-201ENST00000456921 1021 ntBASIC7.67□□□□□ -1.18
NPAS4Q8IUM7 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms